ModCRE DB

Transcription factor

U5LXR9 - TCF3

Transcription factor E2-alpha (Transcription factor 3)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 600 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)5
MotifPredictionSourceDNA bindingSupportLogoActions
MA0091.1 NN 70+% JASPAR CGACCATCTGTT 88.3% identity Open · Scan
M08710_2.00 NN 70+% CisBP CACAGCTGCAG 87.6% identity Open · Scan
MA0092.1 NN 70+% JASPAR GGTCTGGCAT 72.9% identity Open · Scan
M09466_2.00 NN 70+% CisBP GCAGCTGTGT 72.6% identity Open · Scan
M03593_2.00 NN 70+% CisBP ACACCTGCA 70.8% identity Open · Scan
Nearest Neighbor (70% - 40%)1
MotifPredictionSourceDNA bindingSupportLogoActions
M08775_2.00 NN 70-40% CisBP TGCACCTGG 50.8% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 600 aa
485-558

Region 485-558 0 PWM

Residues
74 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
2YPB
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 485-5581 model
Actions
Predicted = Low DIMER_U5LXR9:485:558_2ypb_B_1 2ypb 485-558 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
496-548PF00010Helix-loop-helix DNA-binding domainoverlaps 485-558