ModCRE DB

Transcription factor

U5XK50 - SOX9

UniProtKB entry deleted

39 Generated PWM

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)5
MotifPredictionSourceDNA bindingSupportLogoActions
MA0077.1 NN 70+% JASPAR CCATTGTTC 99.3% identity Open · Scan
M03537_2.00 NN 70+% CisBP ATGAATTGCAGTCAT 92.5% identity Open · Scan
MA0442.1 NN 70+% JASPAR CTTTGT 92.5% identity Open · Scan
M00197_2.00 NN 70+% CisBP AAAACAAT 81.9% identity Open · Scan
MA0868.1 NN 70+% JASPAR AACAATGTGCAGTGTT 81.9% identity Open · Scan
Nearest Neighbor (70% - 40%)34
MotifPredictionSourceDNA bindingSupportLogoActions
M09410_2.00 NN 70-40% CisBP TCCTTTGTTCTC 67.5% identity Open · Scan
MA0867.1 NN 70-40% JASPAR GAACAATTGCAGTGTT 67.5% identity Open · Scan
MA1561.1 NN 70-40% JASPAR ACCGAACAATG 67.5% identity Open · Scan
M00204_2.00 NN 70-40% CisBP AAAACAAT 66.6% identity Open · Scan
MA0869.1 NN 70-40% JASPAR AACAATTTCAGTGTT 65.0% identity Open · Scan
M03508_2.00 NN 70-40% CisBP AACAATAACATTGTT 64.1% identity Open · Scan
MA1152.1 NN 70-40% JASPAR CTATTGTTTT 64.1% identity Open · Scan
M09408_2.00 NN 70-40% CisBP TTTTGTTTT 62.5% identity Open · Scan
MA0866.1 NN 70-40% JASPAR AACAATGGTAGTGTT 62.2% identity Open · Scan
MA1563.1 NN 70-40% JASPAR CACAATGC 60.4% identity Open · Scan
M00201_2.00 NN 70-40% CisBP ATTGTTCTGC 60.0% identity Open · Scan
M03979_2.00 NN 70-40% CisBP AAACAATAACATTGTTT 60.0% identity Open · Scan
M05754_2.00 NN 70-40% CisBP CATTGTTC 60.0% identity Open · Scan
M03516_2.00 NN 70-40% CisBP AACAATGTTCATTGTT 59.5% identity Open · Scan
M02488_2.00 NN 70-40% CisBP CATTGTTTTC 59.0% identity Open · Scan
MA0142.1 NN 70-40% JASPAR CTTTGTTATGCAAAT 58.3% identity Open · Scan
MA0143.4 NN 70-40% JASPAR AAACAATGGAA 58.3% identity Open · Scan
MA1562.1 NN 70-40% JASPAR CCGAACAATG 57.7% identity Open · Scan
MA0078.1 NN 70-40% JASPAR CTCATTGTC 57.6% identity Open · Scan
M09694_2.00 NN 70-40% CisBP AACAATGGAC 57.5% identity Open · Scan
M03983_2.00 NN 70-40% CisBP AAACAATTTCAGTGTTT 56.8% identity Open · Scan
M03974_2.00 NN 70-40% CisBP AACAATAACATTGTT 55.7% identity Open · Scan
M00212_2.00 NN 70-40% CisBP GAACAATA 55.5% identity Open · Scan
MA1120.1 NN 70-40% JASPAR AAACAATGGCA 55.5% identity Open · Scan
M03981_2.00 NN 70-40% CisBP ATTGTTCGGTGGT 55.3% identity Open · Scan
M09404_2.00 NN 70-40% CisBP TAACAATA 55.3% identity Open · Scan
M11309_2.00 NN 70-40% CisBP TTAACAATAC 55.3% identity Open · Scan
MA0087.1 NN 70-40% JASPAR ATTGTTA 55.3% identity Open · Scan
MA0870.1 NN 70-40% JASPAR AACAATAACATTGTT 55.3% identity Open · Scan
M03538_2.00 NN 70-40% CisBP AAACAATGACATTGTTT 53.1% identity Open · Scan
M05769_2.00 NN 70-40% CisBP CCATTGTGAG 53.1% identity Open · Scan
M05892_2.00 NN 70-40% CisBP AAACAATAGA 53.1% identity Open · Scan
MA0514.1 NN 70-40% JASPAR CCTTTGTTTT 53.1% identity Open · Scan
MA0515.1 NN 70-40% JASPAR CCATTGTTTT 53.1% identity Open · Scan
ModCRE0

No generated PWM in this category.

Domains

Imported domain tags3
DUF1898HMG_boxSox_N