Region 285-453 0 PWM
- Residues
- 169 aa
- Domains
- PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
- 3D models
- 1 active PDB
- Templates
- 5T0U
- Sources
- Structure model
Transcription factor
V9GY73 - CTCFL
CCCTC-binding factor
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 627 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M08089_2.00 | Known | CisBP | GGTGCCCCCTGGTG | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
627 aa
285-453
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 285-4531 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_V9GY73:285:453_5t0u_A_1 | 5t0u | 285-453 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 313-336 | PF00096 | Zinc finger, C2H2 type | overlaps 285-453 |
| 398-421 | PF00096 | Zinc finger, C2H2 type | overlaps 285-453 |
| 428-451 | PF00096 | Zinc finger, C2H2 type | overlaps 285-453 |