Region 150-303 0 PWM
- Residues
- 154 aa
- Domains
- PF00907 · T-box
- 3D models
- 1 active PDB
- Templates
- 1XBR
- Sources
- Structure model
Transcription factor
X5DP27 - TBX6
T-box transcription factor TBX6
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 468 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)1
Nearest Neighbor (70% - 40%)2
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M05798_2.00 | NN 70-40% | CisBP | AAAGGTGTGAAA | 54.3% identity | Open · Scan | |
| M02498_2.00 | NN 70-40% | CisBP | AGGTGTCA | 53.4% identity | Open · Scan |
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
468 aa
150-303
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 150-3031 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_X5DP27:150:303_1xbr_A_1 | 1xbr | 150-303 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 150-305 | PF00907 | T-box | overlaps 150-303 |