Region 308-398 2 PWM
- Residues
- 91 aa
- Domains
- PF01388 · ARID/BRIGHT DNA binding domain
- 3D models
- 2 active PDBs · 2 summary rows
- Templates
- 1KQQ, 2OEH
- Sources
- Predicted = Low
Transcription factor
X6RCR8 - ARID4B
AT-rich interactive domain-containing protein 4B (180 kDa Sin3-associated polypeptide) (Histone deacetylase complex subunit SAP180)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 483 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE2
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_X6RCR8_X6RCR8_HUMAN:308:394_1kqq_A_1 | ModCRE | Homology model | AAAATTTTGTTTA | Region 308-394 · 1 3D model | Open · Scan | |
| TFS_tr_X6RCR8_X6RCR8_HUMAN:308:398_2oeh_A_1 | ModCRE | Homology model | ATTTTAAAAATCC | Region 308-398 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
483 aa
308-398
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
2 active PDB models
2 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 308-3982 models · 2 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_X6RCR8_X6RCR8_HUMAN:308:394_1kqq_A_1 | 1kqq | 308-394 | View model · PDB |
| Predicted = Low | TFS_tr_X6RCR8_X6RCR8_HUMAN:308:398_2oeh_A_1 | 2oeh | 308-398 | View model · PDB |
Model-summary evidence imported for this region.
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 170-262 | PF08169 | RBB1NT (NUC162) domain | No overlap with loaded model regions |
| 308-394 | PF01388 | ARID/BRIGHT DNA binding domain | overlaps 308-398 |