CisBP motif

M04428_2.00

Source: CisBP

Download MEME Scan DNA CIS-BP v2 direct source

Sequence logo

Matrix 18 positions

Position	A	C	G	T
1	0.4159	0.1333	0.2873	0.1635
2	0.0539	0.2651	0.2066	0.4743
3	0.9177	0.0178	0.0504	0.0141
4	0.0070	0.9713	0.0070	0.0147
5	0.8245	0.0077	0.0766	0.0912
6	0.0404	0.1455	0.7643	0.0498
7	0.0067	0.0104	0.0440	0.9389
8	0.0101	0.9626	0.0195	0.0078
9	0.0301	0.9180	0.0015	0.0504
10	0.7797	0.0069	0.0439	0.1695
11	0.0022	0.9061	0.0466	0.0451
12	0.0335	0.9543	0.0076	0.0046
13	0.0052	0.9206	0.0052	0.0689
14	0.0000	0.9976	0.0000	0.0024
15	0.1657	0.0858	0.0120	0.7365
16	0.0414	0.0436	0.0103	0.9047
17	0.1424	0.1107	0.3388	0.4080
18	0.4810	0.1595	0.2587	0.1008

TFs using this motif 1 linked TF record

1 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 0 structure-derived. Showing all 1 assignment.

TF record	Motif assignment	Identity	PFAM Families
Q5T5D7	Known		zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,XPA_N,zf-H2C2_2,HypA,C1_4,zf-RING_3,TFIIS_C,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,Prok-RING_1,KRAB,DZR,LIM,GATA,Elf1,DNA_RNApol_7kD,zf-trcl,CxxC_CxxC_SSSS,CpXC,zf-LYAR,BolA