CisBP motif

M04429_2.00

Source: CisBP

Download MEME Scan DNA CIS-BP v2 direct source

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Matrix 18 positions

Position	A	C	G	T
1	0.4629	0.1220	0.2536	0.1614
2	0.0787	0.3300	0.1547	0.4366
3	0.9089	0.0129	0.0665	0.0116
4	0.0105	0.9498	0.0178	0.0219
5	0.8757	0.0304	0.0244	0.0695
6	0.0438	0.0883	0.8398	0.0281
7	0.0027	0.0003	0.0158	0.9812
8	0.0070	0.9717	0.0160	0.0053
9	0.0202	0.9528	0.0034	0.0236
10	0.7080	0.0023	0.1762	0.1135
11	0.0057	0.9323	0.0340	0.0280
12	0.0406	0.9460	0.0039	0.0094
13	0.0062	0.9054	0.0049	0.0834
14	0.0003	0.9967	0.0008	0.0022
15	0.1728	0.0731	0.0299	0.7241
16	0.0314	0.0537	0.0132	0.9017
17	0.1312	0.1100	0.3298	0.4290
18	0.5457	0.1338	0.2536	0.0670

TFs using this motif 1 linked TF record

1 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 0 structure-derived. Showing all 1 assignment.

TF record	Motif assignment	Identity	PFAM Families
Q5T5D7	Known		zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,XPA_N,zf-H2C2_2,HypA,C1_4,zf-RING_3,TFIIS_C,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,Prok-RING_1,KRAB,DZR,LIM,GATA,Elf1,DNA_RNApol_7kD,zf-trcl,CxxC_CxxC_SSSS,CpXC,zf-LYAR,BolA