CisBP motif

M04473_2.00

Source: CisBP

Download MEME Scan DNA CIS-BP v2 direct source

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Matrix 20 positions

Position	A	C	G	T
1	0.3224	0.0235	0.5979	0.0562
2	0.9539	0.0238	0.0079	0.0143
3	0.0005	0.0038	0.0104	0.9852
4	0.0798	0.0073	0.8820	0.0309
5	0.0066	0.9868	0.0011	0.0055
6	0.8095	0.1439	0.0164	0.0302
7	0.1260	0.5403	0.1827	0.1510
8	0.1943	0.3082	0.2493	0.2482
9	0.2683	0.2089	0.2189	0.3039
10	0.3032	0.2143	0.2210	0.2615
11	0.2449	0.3148	0.2127	0.2277
12	0.2049	0.3792	0.2637	0.1521
13	0.1971	0.2665	0.3731	0.1632
14	0.1177	0.0342	0.1070	0.7412
15	0.0940	0.0077	0.8638	0.0345
16	0.0022	0.9978	0.0000	0.0000
17	0.0060	0.9896	0.0011	0.0033
18	0.0038	0.0060	0.0022	0.9879
19	0.0020	0.9128	0.0041	0.0811
20	0.3146	0.1482	0.4290	0.1082

TFs using this motif 1 linked TF record

1 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 0 structure-derived. Showing all 1 assignment.

TF record	Motif assignment	Identity	PFAM Families
Q6DD87	Known		zf-C2H2_4,zf-RING_3,zf-C2H2,TFIIS_C,zf-C2H2_jaz,zf-trcl,XPA_N,Rad50_zn_hook,zf-H2C2_2,CxxC_CxxC_SSSS,DUF2256,Chordopox_RPO7,zf-C2HC_2,GAGA,FYDLN_acid,zf-C2H2_6,zf-UBP,zf-LYAR