CisBP motif

M04484_2.00

Source: CisBP

Download MEME Scan DNA CIS-BP v2 direct source

Sequence logo

Matrix 17 positions

Position	A	C	G	T
1	0.2439	0.3179	0.2784	0.1599
2	0.1152	0.3375	0.0582	0.4891
3	0.2110	0.0023	0.7866	0.0001
4	0.0000	0.9977	0.0004	0.0019
5	0.9995	0.0000	0.0004	0.0001
6	0.0008	0.9988	0.0000	0.0004
7	0.9982	0.0015	0.0003	0.0000
8	0.0056	0.9355	0.0048	0.0542
9	0.4080	0.5577	0.0178	0.0164
10	0.0087	0.9883	0.0005	0.0025
11	0.0256	0.0075	0.0097	0.9572
12	0.0136	0.0671	0.8363	0.0830
13	0.5080	0.2026	0.1180	0.1713
14	0.5026	0.4796	0.0064	0.0114
15	0.8830	0.0063	0.1072	0.0034
16	0.5215	0.1939	0.1632	0.1213
17	0.2877	0.2638	0.1193	0.3291

TFs using this motif 1 linked TF record

1 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 0 structure-derived. Showing all 1 assignment.

TF record	Motif assignment	Identity	PFAM Families
Q8NBB4	Known		zf-C2H2_4,zf-C2H2,UPF0547,zf-C2H2_jaz,zf-H2C2_2,zinc_ribbon_5,zf-AN1,HTH_Tnp_ISL3,DUF2321,RRN7,zf-Mss51,zf-C2H2_6,zinc_ribbon_2,SapB_1,LIM,SCAN,zf-trcl,zinc_ribbon_4,IBR,CxxC_CxxC_SSSS