CisBP motif

M04625_2.00

Source: CisBP

Download MEME Scan DNA CIS-BP v2 direct source

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Matrix 19 positions

Position	A	C	G	T
1	0.3011	0.2095	0.2204	0.2691
2	0.0282	0.0624	0.9073	0.0020
3	0.8426	0.0002	0.1570	0.0002
4	0.0000	0.0006	0.8422	0.1572
5	0.0000	0.0000	0.9998	0.0002
6	0.0002	0.9993	0.0000	0.0005
7	0.0002	0.0000	0.0002	0.9995
8	0.0000	0.9823	0.0000	0.0177
9	0.1502	0.0000	0.0570	0.7929
10	0.0002	0.0002	0.9993	0.0002
11	0.0513	0.0107	0.0002	0.9378
12	0.0226	0.1892	0.0002	0.7881
13	0.9882	0.0064	0.0000	0.0055
14	0.9993	0.0000	0.0000	0.0007
15	0.0000	1.0000	0.0000	0.0000
16	0.8988	0.0151	0.0647	0.0214
17	0.2545	0.3678	0.1439	0.2337
18	0.1409	0.1673	0.0620	0.6298
19	0.1948	0.2238	0.2357	0.3456

TFs using this motif 1 linked TF record

1 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 0 structure-derived. Showing all 1 assignment.

TF record	Motif assignment	Identity	PFAM Families
Q9H4T2	Known		zf-C2H2_4,Ribosomal_L37ae,zf-C2H2,YhfH,zf-C2H2_jaz,C1_3,XPA_N,zf-met,zf-H2C2_2,Yippee,C1_1,A2L_zn_ribbon,C1_4,TFIIS_C,zinc_ribbon_5,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-Mss51,zf-C2H2_6,C1_2,Prok-RING_1,zf-HIT,ZZ,ADK_lid,SprT-like,DZR,LIM,SCAN,DNA_RNApol_7kD,zf-trcl,zinc_ribbon_4,DUF1610,CxxC_CxxC_SSSS,CpXC