CisBP motif

M04893_2.00

Source: CisBP

Download MEME Scan DNA CIS-BP v2 direct source

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Matrix 18 positions

Position	A	C	G	T
1	0.4376	0.1414	0.2163	0.2048
2	0.5063	0.0198	0.2578	0.2161
3	0.0000	0.8296	0.1704	0.0000
4	0.0672	0.6890	0.0000	0.2438
5	0.2902	0.0000	0.6557	0.0541
6	0.0000	0.1425	0.8575	0.0000
7	0.1860	0.2539	0.0004	0.5596
8	0.1497	0.2022	0.1510	0.4972
9	0.1457	0.4014	0.1426	0.3104
10	0.2972	0.1560	0.4096	0.1372
11	0.4563	0.1363	0.2340	0.1735
12	0.5745	0.0000	0.2397	0.1859
13	0.0000	0.8214	0.1786	0.0000
14	0.0557	0.6597	0.0022	0.2823
15	0.2813	0.0000	0.6624	0.0563
16	0.0000	0.1820	0.8180	0.0000
17	0.2451	0.2922	0.0000	0.4627
18	0.1780	0.2188	0.1677	0.4354

TFs using this motif 4 linked TF records

2 known/direct, 2 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 0 structure-derived. Showing all 4 assignments.

TF record	Motif assignment	Identity	PFAM Families
C9JWL3	Known		CP2
Q9NZI7	Known		CP2,SAM_1,Ebola_NP,SAM_PNT
A8KAN5	Nearest Neighbor (>70%)	99.3%	CP2,SAM_1,Ebola_NP,SAM_PNT
F8VX55	Nearest Neighbor (>70%)	86.7%	CP2,DUF2489