CisBP motif
M08090_2.00
Source: CisBP
Sequence logo
Matrix
12 positions
| Position |
A |
C |
G |
T |
| 1 |
0.1530 |
0.0952 |
0.1302 |
0.6216 |
| 2 |
0.1458 |
0.0909 |
0.0956 |
0.6678 |
| 3 |
0.0007 |
0.0000 |
0.0002 |
0.9991 |
| 4 |
0.0063 |
0.0005 |
0.0009 |
0.9924 |
| 5 |
0.0050 |
0.0005 |
0.0004 |
0.9941 |
| 6 |
0.0103 |
0.0009 |
0.0007 |
0.9881 |
| 7 |
0.0062 |
0.0006 |
0.0011 |
0.9920 |
| 8 |
0.0019 |
0.0004 |
0.0002 |
0.9974 |
| 9 |
0.1609 |
0.1551 |
0.2527 |
0.4313 |
| 10 |
0.4198 |
0.1537 |
0.1136 |
0.3129 |
| 11 |
0.3010 |
0.1687 |
0.2308 |
0.2995 |
| 12 |
0.3410 |
0.1857 |
0.1625 |
0.3108 |
TFs using this motif
4 linked TF records
1 known/direct,
2 nearest-neighbor >70%,
1 nearest-neighbor 50–70%,
0 structure-derived.
Showing all 4 assignments.
| TF record |
Motif assignment |
Identity |
PFAM Families |
| Q8TF68 |
Known |
|
zf-C2H2_4,zf-RING_3,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2HC_2,Pex14_N,zf-C2H2_6,zf-FCS |
| A0A804HJE2 |
Nearest Neighbor (>70%) |
90.2% |
zf-C2H2_4,zf-RING_3,zf-C2H2,zf-C2H2_jaz,MSA-2c,zf-met,zf-H2C2_2,zf-C2HC_2,Pex14_N,zf-C2H2_6 |
| A0AA34QVS9 |
Nearest Neighbor (>70%) |
90.2% |
zf-C2H2_4,zf-RING_3,zf-C2H2,zf-CHCC,zf-C2H2_jaz,MSA-2c,zf-met,zf-H2C2_2,zf-C2HC_2,Pex14_N,zf-C2H2_6 |
| Q5T0B9 |
Nearest Neighbor (50–70%) |
62.7% |
zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,AMPKBI,CxxC_CxxC_SSSS,zf-C2HC_2,C1_1,zf-C2H2_6 |