CisBP motif

M08899_2.00

Source: CisBP

Download MEME Scan DNA CIS-BP v2 direct source

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Matrix 20 positions

Position	A	C	G	T
1	0.0642	0.0815	0.8049	0.0494
2	0.1111	0.3926	0.0642	0.4321
3	0.4025	0.2025	0.2395	0.1556
4	0.1086	0.1827	0.0815	0.6272
5	0.0543	0.0346	0.8049	0.1062
6	0.0963	0.6025	0.0741	0.2272
7	0.0519	0.5210	0.1012	0.3259
8	0.1012	0.0148	0.0963	0.7877
9	0.0519	0.0198	0.9136	0.0148
10	0.0593	0.6593	0.0272	0.2543
11	0.3630	0.0642	0.1630	0.4099
12	0.0074	0.0025	0.9877	0.0025
13	0.3802	0.5605	0.0543	0.0049
14	0.5951	0.0346	0.2198	0.1506
15	0.0148	0.0444	0.0296	0.9111
16	0.0395	0.0938	0.1654	0.7012
17	0.5654	0.0815	0.0815	0.2716
18	0.1086	0.0025	0.8519	0.0370
19	0.0741	0.7605	0.0988	0.0667
20	0.6148	0.1259	0.1185	0.1407

TFs using this motif 1 linked TF record

1 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 0 structure-derived. Showing all 1 assignment.

TF record	Motif assignment	Identity	PFAM Families
Q8IVP9	Known		zf-C2H2_4,C1_4,zf-C2H2,zf-ribbon_3,DNA_RNApol_7kD,BHD_1,YhfH,KRAB,XPA_N,zf-H2C2_2,HTH_Tnp_ISL3,CxxC_CxxC_SSSS,DZR,Zn_Tnp_IS1595,Yippee,zf-H2C2_5,zf-C2H2_6,GATA