CisBP motif

M09375_2.00

Source: CisBP

Download MEME Scan DNA CIS-BP v2 direct source

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Matrix 18 positions

Position	A	C	G	T
1	0.2216	0.1080	0.2670	0.4034
2	0.3636	0.1591	0.0227	0.4545
3	0.5682	0.1818	0.1818	0.0682
4	0.4318	0.2500	0.0909	0.2273
5	0.0227	0.9773	0.0000	0.0000
6	0.0909	0.8864	0.0227	0.0000
7	0.5682	0.0682	0.1364	0.2273
8	0.5000	0.0682	0.0455	0.3864
9	0.2500	0.1364	0.0909	0.5227
10	0.4545	0.1364	0.0682	0.3409
11	0.3636	0.1364	0.1364	0.3636
12	0.5000	0.0227	0.0909	0.3864
13	0.6136	0.0227	0.0455	0.3182
14	0.1818	0.8182	0.0000	0.0000
15	0.0682	0.8864	0.0000	0.0455
16	0.5227	0.2045	0.1364	0.1364
17	0.5000	0.1364	0.1818	0.1818
18	0.2159	0.1250	0.2614	0.3977

TFs using this motif 1 linked TF record

1 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 0 structure-derived. Showing all 1 assignment.

TF record	Motif assignment	Identity	PFAM Families
O43918	Known		SAND,zf-HC5HC2H,Prok-RING_1,PHD,Sp100,C1_1,PHD_2,zf-HC5HC2H_2