JASPAR motif

MA0601.1

Source: JASPAR

Download MEME Scan DNA Open in JASPAR

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Matrix 11 positions

Position	A	C	G	T
1	0.4685	0.1772	0.1772	0.1772
2	0.2733	0.0801	0.0801	0.5666
3	0.6090	0.1190	0.0340	0.2380
4	0.1041	0.0000	0.0000	0.8959
5	0.0000	0.0000	0.0000	1.0000
6	1.0000	0.0000	0.0000	0.0000
7	0.9110	0.0000	0.0000	0.0890
8	0.0890	0.0000	0.0000	0.9110
9	0.2617	0.1678	0.0729	0.4975
10	0.4900	0.1700	0.1700	0.1700
11	0.3514	0.2162	0.2162	0.2162

TFs using this motif 7 linked TF records

0 known/direct, 5 nearest-neighbor >70%, 2 nearest-neighbor 50–70%, 0 structure-derived. Showing all 7 assignments.

TF record	Motif assignment	Identity	PFAM Families
H3BQ92	Nearest Neighbor (>70%)	88.5%	ARID
Q8IVW6	Nearest Neighbor (>70%)	84.8%	ARID,DUF3416
B4DQB0	Nearest Neighbor (>70%)	83.7%	ARID
B4DXL8	Nearest Neighbor (>70%)	82.8%	ARID
A0A8I5QL24	Nearest Neighbor (>70%)	76.2%	ARID
K7EJ04	Nearest Neighbor (50–70%)	69.0%	Totivirus_coat,ARID
Q99856	Nearest Neighbor (50–70%)	57.2%	SDA1,DUF3416,ARID,Nop14,TRAP_alpha