JASPAR motif

MA0629.1

Source: JASPAR

Download MEME Scan DNA Open in JASPAR

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Matrix 17 positions

Position	A	C	G	T
1	0.5400	0.1300	0.1500	0.1800
2	0.3267	0.2772	0.2277	0.1683
3	0.1717	0.1111	0.3838	0.3333
4	0.3000	0.2800	0.2300	0.1900
5	0.1300	0.5600	0.0600	0.2500
6	0.0300	0.0100	0.9500	0.0100
7	0.0900	0.7600	0.1500	0.0000
8	0.0099	0.0000	0.0099	0.9802
9	0.0400	0.0000	0.9400	0.0200
10	0.0099	0.0099	0.0000	0.9802
11	0.5657	0.0000	0.0000	0.4343
12	0.7800	0.0400	0.0300	0.1500
13	0.5253	0.1010	0.0101	0.3636
14	0.3131	0.1111	0.3333	0.2424
15	0.2400	0.3600	0.2800	0.1200
16	0.3100	0.1600	0.4300	0.1000
17	0.4141	0.1313	0.1010	0.3535

TFs using this motif 1 linked TF record

0 known/direct, 0 nearest-neighbor >70%, 1 nearest-neighbor 50–70%, 0 structure-derived. Showing all 1 assignment.

TF record	Motif assignment	Identity	PFAM Families
Q17RH7	Nearest Neighbor (50–70%)	52.7%	Homeobox,Terminase_5,Homeobox_KN,Nucleo_P87