JASPAR motif

MA1729.2

Source: JASPAR

Download MEME Scan DNA Open in JASPAR

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Matrix 11 positions

Position	A	C	G	T
1	0.0725	0.8446	0.0231	0.0598
2	0.1942	0.7499	0.0120	0.0439
3	0.9355	0.0104	0.0361	0.0180
4	0.7843	0.0029	0.1935	0.0193
5	0.0075	0.0024	0.9870	0.0031
6	0.9853	0.0040	0.0076	0.0031
7	0.9502	0.0023	0.0352	0.0123
8	0.0857	0.0069	0.8921	0.0153
9	0.9818	0.0071	0.0068	0.0043
10	0.6972	0.1401	0.0283	0.1344
11	0.0350	0.0687	0.0369	0.8593

TFs using this motif 1 linked TF record

1 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 0 structure-derived. Showing all 1 assignment.

TF record	Motif assignment	Identity	PFAM Families
Q8NEM1	Known		zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,XPA_N,zf-H2C2_2,C1_4,zf-AN1,HTH_Tnp_ISL3,Zn_Tnp_IS1595,zf-C2H2_6,Desulfoferrod_N,KRAB,Trm112p,PRP21_like_P,DNA_RNApol_7kD,zf-trcl,DUF1610,CxxC_CxxC_SSSS,DUF164,BolA