ModCRE DB

Predicted = Low motif

a0a087wva2.af3.5

Source: Predicted = Low

Sequence logo

Matrix 25 positions
Position A C G T
1 0.2020 0.2220 0.3430 0.2330
2 0.2040 0.4300 0.2300 0.1350
3 0.0170 0.7330 0.2470 0.0020
4 0.0070 0.7090 0.1910 0.0930
5 0.0020 0.6580 0.1840 0.1560
6 0.0020 0.3300 0.1420 0.5260
7 0.0010 0.0010 0.5940 0.4030
8 0.0010 0.0010 0.8370 0.1620
9 0.0550 0.0010 0.9400 0.0050
10 0.0080 0.0130 0.9780 0.0010
11 0.0010 0.0030 0.8320 0.1640
12 0.0010 0.0060 0.9670 0.0260
13 0.0050 0.0520 0.8600 0.0830
14 0.0010 0.0010 0.9980 0.0010
15 0.0010 0.0010 0.9980 0.0010
16 0.0010 0.0010 0.9980 0.0010
17 0.5900 0.0130 0.3960 0.0010
18 0.1280 0.2450 0.6150 0.0120
19 0.1450 0.2980 0.5490 0.0080
20 0.0140 0.7880 0.1970 0.0010
21 0.0030 0.6690 0.3270 0.0020
22 0.1260 0.3010 0.3470 0.2260
23 0.4040 0.1840 0.1780 0.2330
24 0.6700 0.0190 0.2010 0.1100
25 0.6110 0.1560 0.1160 0.1160
TFs using this motif 1 linked TF record

0 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 1 structure-derived. Showing all 1 assignment.

TF record Motif assignment Identity PFAM Families
A0A087WVA2 AF3-derived ModCRE zf-C2H2_4,C1_4,zf-C2H2,TFIIS_C,zf-BED,zf-C2H2_jaz,KRAB,XPA_N,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,zf-C2H2_6,zf-LYAR
3D models 1 model
ModelTemplateResiduesActions
a0a087wva2.af3.5 View 3D Download PDB