ModCRE DB

Predicted = Low motif

a0a0a0msl2.af3.3

Source: Predicted = Low

Sequence logo

Matrix 18 positions
Position A C G T
1 0.1800 0.0250 0.0020 0.7930
2 0.1060 0.0070 0.0010 0.8860
3 0.3700 0.1400 0.0010 0.4890
4 0.4000 0.0140 0.0390 0.5460
5 0.2120 0.3170 0.0040 0.4670
6 0.0010 0.0950 0.1250 0.7790
7 0.0010 0.9290 0.0430 0.0270
8 0.0010 0.9980 0.0010 0.0010
9 0.0550 0.9440 0.0010 0.0010
10 0.0020 0.8570 0.1400 0.0010
11 0.0010 0.9980 0.0010 0.0010
12 0.0010 0.5050 0.0010 0.4920
13 0.0100 0.4530 0.4430 0.0940
14 0.0230 0.2580 0.7060 0.0140
15 0.0190 0.2370 0.6980 0.0460
16 0.0160 0.5860 0.3820 0.0150
17 0.3540 0.2180 0.4240 0.0040
18 0.2970 0.0130 0.4260 0.2640
TFs using this motif 1 linked TF record

0 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 1 structure-derived. Showing all 1 assignment.

TF record Motif assignment Identity PFAM Families
A0A0A0MSL2 AF3-derived ModCRE zf-C2H2_4,zf-C2H2,zf-CHCC,zf-MYND,zf-C2H2_jaz,DUF2321,zf-TRAF,zf-C2H2_6,zf-H2C2_2,zf-C2H2_2,GAGA,zf-H2C2_5,DZR,GATA
3D models 1 model
ModelTemplateResiduesActions
a0a0a0msl2.af3.3 View 3D Download PDB