ModCRE DB

Predicted = Low motif

a0a0c4dgm2.af3.3

Source: Predicted = Low

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Matrix 27 positions
Position A C G T
1 0.2150 0.3830 0.2060 0.1950
2 0.2410 0.2030 0.3680 0.1880
3 0.3060 0.2330 0.3810 0.0800
4 0.0310 0.5590 0.2850 0.1250
5 0.0550 0.0390 0.9030 0.0020
6 0.5420 0.0160 0.0310 0.4110
7 0.0000 0.2820 0.6410 0.0770
8 0.2930 0.4320 0.2350 0.0400
9 0.0000 0.9990 0.0000 0.0000
10 0.1070 0.5830 0.1110 0.1980
11 0.0290 0.8960 0.0250 0.0500
12 0.0080 0.2720 0.0000 0.7190
13 0.3680 0.3310 0.0000 0.3000
14 0.0250 0.9100 0.0000 0.0640
15 0.0030 0.7690 0.0020 0.2270
16 0.1410 0.8080 0.0360 0.0160
17 0.0020 0.9970 0.0000 0.0000
18 0.0530 0.8400 0.1010 0.0060
19 0.0010 0.9980 0.0000 0.0000
20 0.0570 0.9370 0.0060 0.0000
21 0.0010 0.9590 0.0020 0.0380
22 0.0000 0.8450 0.1530 0.0010
23 0.0320 0.7190 0.2480 0.0000
24 0.1670 0.6640 0.0980 0.0710
25 0.0840 0.6950 0.2110 0.0100
26 0.1680 0.6460 0.0780 0.1090
27 0.1630 0.3780 0.2330 0.2260
TFs using this motif 1 linked TF record

0 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 1 structure-derived. Showing all 1 assignment.

TF record Motif assignment Identity PFAM Families
A0A0C4DGM2 AF3-derived ModCRE zf-C2H2_4,zf-C2H2,SCAN,DNA_RNApol_7kD,zf-C2H2_jaz,DUF3027,XPA_N,zf-met,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,DZR,Zn_Tnp_IS1595,FYDLN_acid,zf-C2H2_6,A2L_zn_ribbon
3D models 1 model
ModelTemplateResiduesActions
a0a0c4dgm2.af3.3 View 3D Download PDB