Predicted = Low motif
a0a0c4dgr5.af3.3
Source: Predicted = Low
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2250 | 0.3580 | 0.2560 | 0.1610 |
| 2 | 0.1570 | 0.4160 | 0.2560 | 0.1720 |
| 3 | 0.1920 | 0.3610 | 0.2360 | 0.2110 |
| 4 | 0.2600 | 0.1930 | 0.3180 | 0.2300 |
| 5 | 0.2050 | 0.2760 | 0.3410 | 0.1790 |
| 6 | 0.0590 | 0.0670 | 0.8730 | 0.0000 |
| 7 | 0.0000 | 0.0000 | 0.9990 | 0.0000 |
| 8 | 0.0000 | 0.0000 | 0.9990 | 0.0000 |
| 9 | 0.0020 | 0.0020 | 0.9950 | 0.0010 |
| 10 | 0.0000 | 0.0170 | 0.9830 | 0.0000 |
| 11 | 0.0000 | 0.4290 | 0.5700 | 0.0000 |
| 12 | 0.0000 | 0.7330 | 0.2660 | 0.0000 |
| 13 | 0.0000 | 0.7400 | 0.2590 | 0.0000 |
| 14 | 0.0000 | 0.8040 | 0.1950 | 0.0010 |
| 15 | 0.0100 | 0.6720 | 0.2600 | 0.0580 |
| 16 | 0.2290 | 0.2890 | 0.4140 | 0.0680 |
| 17 | 0.2660 | 0.2480 | 0.3040 | 0.1810 |
| 18 | 0.2140 | 0.2280 | 0.3280 | 0.2300 |
TFs using this motif
0 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 1 structure-derived. Showing all 1 assignment.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| A0A0C4DGR5 | AF3-derived ModCRE | zf-C2H2_4,C1_4,zf-C2H2,DUF2296,zf-C2H2_jaz,DUF2321,KRAB,zf-H2C2_2,DZR,HypA,CxxC_CxxC_SSSS,GAGA,Cys_rich_CPXG,CpXC,HTH_Tnp_ISL3,FYDLN_acid,zf-C2H2_6,A2L_zn_ribbon |
3D models
| Model | Template | Residues | Actions |
|---|---|---|---|
| a0a0c4dgr5.af3.3 | View 3D Download PDB |