ModCRE DB

Predicted = Low motif

a0a3f2ypb8.af3.3

Source: Predicted = Low

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Matrix 30 positions
Position A C G T
1 0.2000 0.1500 0.6280 0.0220
2 0.0130 0.3950 0.5920 0.0000
3 0.0000 0.1110 0.8880 0.0000
4 0.0000 0.8070 0.1920 0.0000
5 0.0000 0.8050 0.1930 0.0010
6 0.0000 0.3080 0.6910 0.0000
7 0.0000 0.2470 0.5630 0.1890
8 0.2040 0.7950 0.0000 0.0000
9 0.0010 0.9980 0.0000 0.0000
10 0.0000 0.9990 0.0000 0.0000
11 0.0060 0.9710 0.0220 0.0000
12 0.0000 0.8220 0.1770 0.0000
13 0.1930 0.8060 0.0000 0.0000
14 0.0000 0.9990 0.0000 0.0000
15 0.0080 0.7040 0.2880 0.0000
16 0.0780 0.7130 0.0340 0.1750
17 0.0190 0.9800 0.0000 0.0000
18 0.1350 0.3660 0.2680 0.2300
19 0.3990 0.0920 0.2890 0.2200
20 0.0310 0.9670 0.0000 0.0010
21 0.0010 0.7220 0.0000 0.2760
22 0.0020 0.9970 0.0000 0.0000
23 0.5330 0.4660 0.0000 0.0000
24 0.1220 0.8770 0.0000 0.0000
25 0.0000 0.9800 0.0000 0.0190
26 0.0010 0.9980 0.0000 0.0000
27 0.3170 0.3940 0.0010 0.2870
28 0.3110 0.2680 0.3170 0.1040
29 0.1470 0.2270 0.6210 0.0050
30 0.2370 0.0300 0.4300 0.3030
TFs using this motif 1 linked TF record

0 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 1 structure-derived. Showing all 1 assignment.

TF record Motif assignment Identity PFAM Families
A0A3F2YPB8 AF3-derived ModCRE zf-C2H2_4,zf-C2H2,TFIIS_C,zf-BED,zf-C2H2_jaz,zf-trcl,KRAB,XPA_N,zf-met,zf-H2C2_2,CxxC_CxxC_SSSS,HTH_Tnp_ISL3,Zn_Tnp_IS1595,C1_1,zf-C2H2_6
3D models 1 model
ModelTemplateResiduesActions
a0a3f2ypb8.af3.3 View 3D Download PDB