ModCRE DB

Predicted = Low motif

a0a8v8tmc2.af3.0

Source: Predicted = Low

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Matrix 28 positions
Position A C G T
1 0.1660 0.2450 0.3610 0.2290
2 0.0010 0.2920 0.6860 0.0210
3 0.0010 0.0010 0.9970 0.0010
4 0.0020 0.0030 0.9950 0.0010
5 0.0010 0.0010 0.7960 0.2030
6 0.0030 0.1300 0.8660 0.0010
7 0.0010 0.4510 0.3150 0.2330
8 0.3020 0.0010 0.6240 0.0730
9 0.1840 0.6410 0.0430 0.1320
10 0.1210 0.0240 0.3040 0.5500
11 0.0010 0.0010 0.9980 0.0010
12 0.0010 0.6480 0.3280 0.0240
13 0.0010 0.0280 0.9630 0.0090
14 0.0010 0.0010 0.9970 0.0010
15 0.0010 0.6100 0.3890 0.0010
16 0.0010 0.0890 0.6450 0.2650
17 0.0010 0.1730 0.8250 0.0010
18 0.0050 0.3690 0.5970 0.0290
19 0.0010 0.0010 0.9220 0.0760
20 0.0010 0.0010 0.9760 0.0230
21 0.0010 0.0010 0.9980 0.0010
22 0.0060 0.0010 0.9930 0.0010
23 0.8750 0.0010 0.1230 0.0010
24 0.0460 0.0010 0.9130 0.0400
25 0.0010 0.0010 0.8290 0.1700
26 0.0010 0.0660 0.9270 0.0060
27 0.0010 0.6610 0.2460 0.0930
28 0.1200 0.4970 0.1770 0.2050
TFs using this motif 1 linked TF record

0 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 1 structure-derived. Showing all 1 assignment.

TF record Motif assignment Identity PFAM Families
A0A8V8TMC2 AF3-derived ModCRE zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,XPA_N,zf-H2C2_2,BTB,DUF2180,zinc_ribbon_5,zf-AN1,zf-C2H2_6,zf-FCS,zf-H2C2_5,DZR,LIM,zf-trcl,CxxC_CxxC_SSSS,zf-C2HC_2,WAC_Acf1_DNA_bd,BolA
3D models 1 model
ModelTemplateResiduesActions
a0a8v8tmc2.af3.0 View 3D Download PDB