ModCRE DB

Predicted = Low motif

a0a8v8tmc2.af3.2

Source: Predicted = Low

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Matrix 27 positions
Position A C G T
1 0.1470 0.3120 0.4490 0.0920
2 0.0950 0.4520 0.4450 0.0080
3 0.0150 0.3000 0.6820 0.0030
4 0.0050 0.6320 0.3040 0.0600
5 0.0010 0.7570 0.1790 0.0630
6 0.0010 0.0800 0.0340 0.8850
7 0.0010 0.9970 0.0010 0.0010
8 0.0010 0.9980 0.0010 0.0010
9 0.0050 0.9930 0.0010 0.0020
10 0.0100 0.7530 0.2320 0.0050
11 0.0010 0.0140 0.8000 0.1860
12 0.0010 0.4990 0.5000 0.0010
13 0.0010 0.8620 0.1370 0.0010
14 0.0010 0.6670 0.3310 0.0010
15 0.0010 0.8590 0.1400 0.0010
16 0.0010 0.5500 0.4480 0.0010
17 0.0010 0.0870 0.9110 0.0010
18 0.0010 0.8510 0.1480 0.0010
19 0.0560 0.1000 0.8430 0.0010
20 0.5370 0.1020 0.2650 0.0960
21 0.0170 0.7040 0.2650 0.0140
22 0.0050 0.6690 0.3260 0.0010
23 0.0120 0.2010 0.7780 0.0080
24 0.0010 0.9970 0.0010 0.0010
25 0.0010 0.7880 0.1840 0.0270
26 0.0170 0.7370 0.2380 0.0090
27 0.1670 0.5840 0.1990 0.0500
TFs using this motif 1 linked TF record

0 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 1 structure-derived. Showing all 1 assignment.

TF record Motif assignment Identity PFAM Families
A0A8V8TMC2 AF3-derived ModCRE zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,XPA_N,zf-H2C2_2,BTB,DUF2180,zinc_ribbon_5,zf-AN1,zf-C2H2_6,zf-FCS,zf-H2C2_5,DZR,LIM,zf-trcl,CxxC_CxxC_SSSS,zf-C2HC_2,WAC_Acf1_DNA_bd,BolA
3D models 1 model
ModelTemplateResiduesActions
a0a8v8tmc2.af3.2 View 3D Download PDB