ModCRE DB

Predicted = Low motif

a0a8v8tmc2.af3.4

Source: Predicted = Low

Download MEME Scan DNA

Sequence logo

Matrix 27 positions
Position A C G T
1 0.1260 0.2420 0.4220 0.2100
2 0.0660 0.4000 0.5330 0.0010
3 0.0040 0.2530 0.7420 0.0010
4 0.0210 0.1330 0.8460 0.0010
5 0.0800 0.0300 0.7660 0.1250
6 0.0390 0.2050 0.2280 0.5280
7 0.0010 0.9910 0.0010 0.0080
8 0.0010 0.9980 0.0010 0.0010
9 0.0010 0.9980 0.0010 0.0010
10 0.0080 0.9900 0.0010 0.0010
11 0.3290 0.3280 0.0370 0.3060
12 0.0310 0.8140 0.1360 0.0190
13 0.0020 0.8280 0.1030 0.0670
14 0.0040 0.7460 0.2480 0.0010
15 0.0010 0.9180 0.0810 0.0010
16 0.0010 0.5850 0.4140 0.0010
17 0.0040 0.2700 0.7260 0.0010
18 0.0010 0.8530 0.1460 0.0010
19 0.6440 0.2170 0.1340 0.0050
20 0.2340 0.3810 0.2290 0.1560
21 0.0630 0.6590 0.2550 0.0240
22 0.0600 0.7320 0.2070 0.0010
23 0.0110 0.6880 0.3000 0.0010
24 0.2640 0.5620 0.1600 0.0150
25 0.0020 0.7860 0.1450 0.0670
26 0.0010 0.7650 0.2050 0.0300
27 0.1710 0.5660 0.2030 0.0610
TFs using this motif 1 linked TF record

0 known/direct, 0 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 1 structure-derived. Showing all 1 assignment.

TF record Motif assignment Identity PFAM Families
A0A8V8TMC2 AF3-derived ModCRE zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,XPA_N,zf-H2C2_2,BTB,DUF2180,zinc_ribbon_5,zf-AN1,zf-C2H2_6,zf-FCS,zf-H2C2_5,DZR,LIM,zf-trcl,CxxC_CxxC_SSSS,zf-C2HC_2,WAC_Acf1_DNA_bd,BolA
3D models 1 model
ModelTemplateResiduesActions
a0a8v8tmc2.af3.4 View 3D Download PDB