CisBP motif

M03479_2.00

Source: CisBP

Download MEME Scan DNA CIS-BP v2 direct source

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Matrix 15 positions

Position	A	C	G	T
1	0.0100	0.5354	0.0027	0.4519
2	0.0003	0.0004	0.0104	0.9890
3	0.0002	0.0001	0.9996	0.0001
4	0.0003	0.0003	0.9992	0.0003
5	0.0380	0.9616	0.0002	0.0003
6	0.7391	0.0527	0.0851	0.1230
7	0.2433	0.4039	0.1312	0.2216
8	0.2227	0.2438	0.2625	0.2709
9	0.2105	0.1577	0.3526	0.2791
10	0.1316	0.1015	0.0618	0.7050
11	0.0005	0.0002	0.9723	0.0270
12	0.0001	0.9996	0.0001	0.0002
13	0.0001	0.9996	0.0001	0.0002
14	0.9907	0.0090	0.0002	0.0001
15	0.9507	0.0018	0.0333	0.0142

TFs using this motif 10 linked TF records

2 known/direct, 8 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 0 structure-derived. Showing all 10 assignments.

TF record	Motif assignment	Identity	PFAM Families
Q5W0Y9	Known		HTH_29,DIX,NfI_DNAbd_pre-N,MH1
O00712	Known		MH1,NfI_DNAbd_pre-N,CTF_NFI
B4DS74	Nearest Neighbor (>70%)	99.4%	MH1,NfI_DNAbd_pre-N,CTF_NFI
U3KPY9	Nearest Neighbor (>70%)	98.7%	HTH_29,NfI_DNAbd_pre-N,MH1
A0A8V8TQI3	Nearest Neighbor (>70%)	92.3%	HTH_29,MH1,NfI_DNAbd_pre-N,CTF_NFI
B1AKN5	Nearest Neighbor (>70%)	90.9%	MH1,CTF_NFI,DUF605,HTH_29,NfI_DNAbd_pre-N
A0A8I5KYE6	Nearest Neighbor (>70%)	89.2%	MH1,CTF_NFI
Q7Z3K7	Nearest Neighbor (>70%)	89.2%	MH1,NfI_DNAbd_pre-N,CTF_NFI
Q6FI30	Nearest Neighbor (>70%)	87.0%	MH1,NfI_DNAbd_pre-N,CTF_NFI
B7Z4T6	Nearest Neighbor (>70%)	86.0%	MH1,NfI_DNAbd_pre-N,CTF_NFI