CisBP motif

M04886_2.00

Source: CisBP

Download MEME Scan DNA CIS-BP v2 direct source

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Matrix 16 positions

Position	A	C	G	T
1	0.5594	0.0051	0.1897	0.2457
2	0.0000	0.8357	0.1643	0.0000
3	0.1011	0.4844	0.0397	0.3748
4	0.3978	0.0250	0.4667	0.1105
5	0.0000	0.1431	0.8569	0.0000
6	0.2562	0.1840	0.0000	0.5597
7	0.1974	0.1864	0.0873	0.5289
8	0.1609	0.3562	0.1525	0.3303
9	0.3347	0.1499	0.3388	0.1767
10	0.5067	0.1025	0.1981	0.1927
11	0.5907	0.0185	0.1612	0.2296
12	0.0000	0.8384	0.1616	0.0000
13	0.0983	0.4983	0.0325	0.3708
14	0.3606	0.0431	0.4829	0.1133
15	0.0013	0.1758	0.8229	0.0000
16	0.2652	0.1709	0.0013	0.5626

TFs using this motif 6 linked TF records

2 known/direct, 0 nearest-neighbor >70%, 4 nearest-neighbor 50–70%, 0 structure-derived. Showing all 6 assignments.

TF record	Motif assignment	Identity	PFAM Families
Q5JV87	Known		CP2
Q9NZI6	Known		CP2,SAM_1
F8VX55	Nearest Neighbor (50–70%)	62.8%	CP2,DUF2489
A8KAN5	Nearest Neighbor (50–70%)	62.4%	CP2,SAM_1,Ebola_NP,SAM_PNT
F8WEP8	Nearest Neighbor (50–70%)	57.2%	SAM_1,SAM_PNT,SAM_2
B3KN18	Nearest Neighbor (50–70%)	54.7%	SAM_PNT,SAM_1,SAM_2