JASPAR motif
MA0004.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2000 | 0.8000 | 0.0000 | 0.0000 |
| 2 | 0.9500 | 0.0000 | 0.0500 | 0.0000 |
| 3 | 0.0000 | 1.0000 | 0.0000 | 0.0000 |
| 4 | 0.0000 | 0.0000 | 1.0000 | 0.0000 |
| 5 | 0.0000 | 0.0000 | 0.0000 | 1.0000 |
| 6 | 0.0000 | 0.0000 | 1.0000 | 0.0000 |
TFs using this motif
0 known/direct, 5 nearest-neighbor >70%, 4 nearest-neighbor 50–70%, 0 structure-derived. Showing all 9 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| I6L9E7 | Nearest Neighbor (>70%) | 95.8% | HLH,PAS,PAS_3,PAS_9,PAS_4 |
| Q53F30 | Nearest Neighbor (>70%) | 95.2% | HLH,PAS_4,PAS,PAS_3 |
| A8K6P0 | Nearest Neighbor (>70%) | 89.5% | HLH,PAS,PAS_3,Ribosomal_S13_N,PAS_9,PAS_4 |
| B0AZM1 | Nearest Neighbor (>70%) | 89.5% | HLH,PAS,PAS_3,PAS_9,PAS_4 |
| B4E3L5 | Nearest Neighbor (>70%) | 85.5% | HLH,PAS,PAS_3,Ribosomal_S13_N,PAS_9,PAS_4 |
| Q86TN1 | Nearest Neighbor (50–70%) | 66.5% | PAS_4,HLH,PAS,PAS_3 |
| X5DP31 | Nearest Neighbor (50–70%) | 60.5% | HLH,PAS,PAS_3,PAS_9,PAS_4,PAS_6 |
| X5D7T2 | Nearest Neighbor (50–70%) | 58.1% | HLH,PAS,PAS_3,PAS_9,PAS_4,PAS_6 |
| X5D8U0 | Nearest Neighbor (50–70%) | 50.7% | PAS,PAS_9,PAS_6,PAS_3 |