JASPAR motif

MA0628.1

Source: JASPAR

Download MEME Scan DNA Open in JASPAR

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Matrix 10 positions

Position	A	C	G	T
1	0.5070	0.1930	0.2110	0.0890
2	0.1510	0.3510	0.1450	0.3530
3	0.0320	0.0100	0.0080	0.9500
4	0.9041	0.0699	0.0080	0.0180
5	0.9380	0.0340	0.0140	0.0140
6	0.0140	0.0140	0.0340	0.9380
7	0.0180	0.0080	0.0699	0.9041
8	0.9500	0.0080	0.0100	0.0320
9	0.3530	0.1450	0.3510	0.1510
10	0.0890	0.2110	0.1930	0.5070

TFs using this motif 7 linked TF records

3 known/direct, 1 nearest-neighbor >70%, 3 nearest-neighbor 50–70%, 0 structure-derived. Showing all 7 assignments.

TF record	Motif assignment	Identity	PFAM Families
A0A1C7CYY7	Known		Pou,Homeobox,HTH_32,Flu_NS1,HTH_31,Homeobox_KN
Q14863	Known		Pou,Homeobox,HTH_32,Flu_NS1,HTH_31,Homeobox_KN
Q3B832	Known		Homeobox,Taeniidae_ag,HTH_32,HTH_23,Homeobox_KN
B3KT91	Nearest Neighbor (>70%)	99.6%	Pou,Homeobox,Taeniidae_ag,HTH_32,HTH_31,Homeobox_KN
A0A140GPP8	Nearest Neighbor (50–70%)	53.9%	Homeobox_KN,Homeobox,Pou
H0YLC5	Nearest Neighbor (50–70%)	52.1%	Pou
Q16423	Nearest Neighbor (50–70%)	51.7%	Homeobox