JASPAR motif
MA0871.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.5233 | 0.1395 | 0.3372 | 0.0000 |
| 2 | 0.1592 | 0.1529 | 0.2166 | 0.4713 |
| 3 | 0.0133 | 0.9867 | 0.0000 | 0.0000 |
| 4 | 0.9867 | 0.0000 | 0.0000 | 0.0133 |
| 5 | 0.0104 | 0.7708 | 0.0833 | 0.1354 |
| 6 | 0.3391 | 0.0174 | 0.6435 | 0.0000 |
| 7 | 0.0851 | 0.0851 | 0.0426 | 0.7872 |
| 8 | 0.0000 | 0.0000 | 1.0000 | 0.0000 |
| 9 | 0.6916 | 0.1402 | 0.1402 | 0.0280 |
| 10 | 0.0000 | 0.3895 | 0.2316 | 0.3789 |
TFs using this motif
3 known/direct, 1 nearest-neighbor >70%, 4 nearest-neighbor 50–70%, 0 structure-derived. Showing all 8 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| B7Z757 | Known | HLH | |
| O14948 | Known | HLH,DUF3371 | |
| Q75KY0 | Known | DUF342,HLH,DUF3371 | |
| A0A8I5KRZ6 | Nearest Neighbor (>70%) | 70.8% | Ribophorin_I,DUF3313,HLH,RNA_pol_Rpb4 |
| A0A8I5KSZ4 | Nearest Neighbor (50–70%) | 58.3% | HLH,DUF3371,DUF3313,RNA_pol_Rpb4,5-FTHF_cyc-lig,Ribophorin_I |
| A0A8I5KTU3 | Nearest Neighbor (50–70%) | 58.3% | HLH,5-FTHF_cyc-lig,DUF3371 |
| A8K5K3 | Nearest Neighbor (50–70%) | 58.3% | HLH,DUF3371,DUF3313,RNA_pol_Rpb4,5-FTHF_cyc-lig |
| B4DNC7 | Nearest Neighbor (50–70%) | 58.3% | HLH,DUF3371,DUF3313,5-FTHF_cyc-lig,Ribophorin_I |