CisBP motif

M03330_2.00

Source: CisBP

Download MEME Scan DNA CIS-BP v2 direct source

Sequence logo

Matrix 13 positions

Position	A	C	G	T
1	0.0027	0.0020	0.9932	0.0020
2	0.9918	0.0027	0.0014	0.0041
3	0.9798	0.0000	0.0034	0.0168
4	0.1258	0.4069	0.1306	0.3368
5	0.3535	0.1091	0.4894	0.0480
6	0.0181	0.0027	0.0027	0.9765
7	0.0048	0.0014	0.0054	0.9885
8	0.0000	1.0000	0.0000	0.0000
9	0.0013	0.1695	0.1871	0.6421
10	0.7070	0.1156	0.1754	0.0019
11	0.0034	0.0061	0.9844	0.0061
12	0.9785	0.0114	0.0027	0.0074
13	0.9315	0.0160	0.0115	0.0410

TFs using this motif 6 linked TF records

2 known/direct, 1 nearest-neighbor >70%, 3 nearest-neighbor 50–70%, 0 structure-derived. Showing all 6 assignments.

TF record	Motif assignment	Identity	PFAM Families
E9PMQ6	Known		HSF_DNA-bind,DUF247,NPV_P10,Vert_HS_TF,DUF2365
Q00613	Known		HSF factors{3.4.1}
Q53HT3	Nearest Neighbor (>70%)	97.4%	HSF_DNA-bind,DUF972,DUF247,NPV_P10,Vert_HS_TF,DUF2365,YlbD_coat,Nnf1
B4DJS4	Nearest Neighbor (50–70%)	69.4%	HSF_DNA-bind
E5RG51	Nearest Neighbor (50–70%)	69.4%	HSF_DNA-bind,AP_endonuc_2_N
E5RK26	Nearest Neighbor (50–70%)	69.4%	HSF_DNA-bind