CisBP motif
M03481_2.00
Source: CisBP
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2499 | 0.2431 | 0.2646 | 0.2424 |
| 2 | 0.2224 | 0.1533 | 0.3769 | 0.2473 |
| 3 | 0.0000 | 0.0000 | 0.0000 | 1.0000 |
| 4 | 0.0000 | 0.0000 | 1.0000 | 0.0000 |
| 5 | 0.0000 | 1.0000 | 0.0000 | 0.0000 |
| 6 | 0.0000 | 1.0000 | 0.0000 | 0.0000 |
| 7 | 1.0000 | 0.0000 | 0.0000 | 0.0000 |
| 8 | 1.0000 | 0.0000 | 0.0000 | 0.0000 |
| 9 | 0.2570 | 0.2364 | 0.3183 | 0.1883 |
| 10 | 0.3055 | 0.1592 | 0.1820 | 0.3534 |
TFs using this motif
7 known/direct, 8 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 0 structure-derived. Showing all 15 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| A0A590UK73 | Known | HTH_29,MH1,NfI_DNAbd_pre-N,CTF_NFI | |
| A0A8V8TP49 | Known | HTH_29,MH1,NfI_DNAbd_pre-N,CTF_NFI | |
| B1AKN6 | Known | HTH_29,MH1,NfI_DNAbd_pre-N,CTF_NFI | |
| B1AKN7 | Known | HTH_29,MH1,NfI_DNAbd_pre-N,CTF_NFI | |
| B4DRN9 | Known | HTH_29,MH1,NfI_DNAbd_pre-N,CTF_NFI | |
| S4R3W2 | Known | HTH_29,MH1,NfI_DNAbd_pre-N,CTF_NFI | |
| Q12857 | Known | HTH_29,MH1,NfI_DNAbd_pre-N,CTF_NFI | |
| U3KPY9 | Nearest Neighbor (>70%) | 91.8% | HTH_29,NfI_DNAbd_pre-N,MH1 |
| B1AKN5 | Nearest Neighbor (>70%) | 88.1% | MH1,CTF_NFI,DUF605,HTH_29,NfI_DNAbd_pre-N |
| A0A8I5KYE6 | Nearest Neighbor (>70%) | 86.5% | MH1,CTF_NFI |
| Q7Z3K7 | Nearest Neighbor (>70%) | 86.0% | MH1,NfI_DNAbd_pre-N,CTF_NFI |
| A0A8V8TQI3 | Nearest Neighbor (>70%) | 81.9% | HTH_29,MH1,NfI_DNAbd_pre-N,CTF_NFI |
| B4DS74 | Nearest Neighbor (>70%) | 79.5% | MH1,NfI_DNAbd_pre-N,CTF_NFI |
| B7Z4T6 | Nearest Neighbor (>70%) | 76.0% | MH1,NfI_DNAbd_pre-N,CTF_NFI |
| Q6FI30 | Nearest Neighbor (>70%) | 76.0% | MH1,NfI_DNAbd_pre-N,CTF_NFI |