JASPAR motif
MA0163.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.0000 | 0.0000 | 1.0000 | 0.0000 |
| 2 | 0.1667 | 0.0000 | 0.7778 | 0.0556 |
| 3 | 0.0000 | 0.0000 | 1.0000 | 0.0000 |
| 4 | 0.0000 | 0.0000 | 0.9444 | 0.0556 |
| 5 | 0.0000 | 0.7778 | 0.2222 | 0.0000 |
| 6 | 0.0000 | 0.8333 | 0.0556 | 0.1111 |
| 7 | 0.2222 | 0.5556 | 0.0556 | 0.1667 |
| 8 | 0.6667 | 0.0000 | 0.0000 | 0.3333 |
| 9 | 0.6111 | 0.2778 | 0.1111 | 0.0000 |
| 10 | 0.1111 | 0.0000 | 0.7778 | 0.1111 |
| 11 | 0.0000 | 0.0000 | 1.0000 | 0.0000 |
| 12 | 0.0000 | 0.0000 | 1.0000 | 0.0000 |
| 13 | 0.0000 | 0.0000 | 0.8889 | 0.1111 |
| 14 | 0.1111 | 0.0000 | 0.8889 | 0.0000 |
TFs using this motif
1 known/direct, 7 nearest-neighbor >70%, 4 nearest-neighbor 50–70%, 0 structure-derived. Showing all 12 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| Q6DJT9 | Known | zf-C2H2_4,PyrI_C,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2H2_6 | |
| B2R968 | Nearest Neighbor (>70%) | 99.6% | zf-C2H2_4,PyrI_C,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2H2_6 |
| A0A0D9SEQ4 | Nearest Neighbor (>70%) | 78.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,HypA,zinc_ribbon_5,DUF2321,zf-C2H2_6,DUF629,FYVE,ADK_lid,Elf1,zf-BED,zinc_ribbon_4,DUF2072,CxxC_CxxC_SSSS,zf-C2H2_2,Baculo_ME53,zf-LYAR |
| A0A0D9SFM8 | Nearest Neighbor (>70%) | 78.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,HypA,zinc_ribbon_5,DUF2321,zf-C2H2_6,DUF629,FYVE,ADK_lid,Elf1,zf-BED,zinc_ribbon_4,DUF2072,CxxC_CxxC_SSSS,zf-C2H2_2,Baculo_ME53,zf-LYAR |
| A0A0D9SGF7 | Nearest Neighbor (>70%) | 78.0% | zf-C2H2_4,zf-DBF,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,HypA,zinc_ribbon_5,DUF2321,zf-C2H2_6,DUF629,FYVE,TF_Zn_Ribbon,ADK_lid,DZR,Elf1,zf-BED,zinc_ribbon_4,DUF2072,CxxC_CxxC_SSSS,zf-C2H2_2,Baculo_ME53,zf-LYAR |
| A0A3B3IRN7 | Nearest Neighbor (>70%) | 71.1% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,Ogr_Delta,zf-met,zf-H2C2_2,CxxC_CxxC_SSSS,zf-C2H2_2,zf-C2HC_2,DUF899,DUF2321,zf-C2H2_6 |
| Q9UM63 | Nearest Neighbor (>70%) | 70.7% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,DUF2321,zf-C2H2_6 |
| A0A0D9SFI7 | Nearest Neighbor (>70%) | 70.5% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,HypA,DUF899,zinc_ribbon_5,DUF2321,zf-C2H2_6,DUF629,FYVE,TF_Zn_Ribbon,ADK_lid,DZR,Elf1,zf-BED,zinc_ribbon_4,CxxC_CxxC_SSSS,zf-C2H2_2,Baculo_ME53 |
| Q15927 | Nearest Neighbor (50–70%) | 54.3% | zf-C2H2_4,Elf1,zf-C2H2,C1_2,Desulfoferrod_N,FYVE,zf-trcl,zf-HIT,XPA_N,zf-H2C2_2,Ribosomal_S14,CxxC_CxxC_SSSS,Zn_Tnp_IS1595,C1_1,DUF2321,zf-C2H2_6 |
| A8K3T5 | Nearest Neighbor (50–70%) | 53.0% | zf-C2H2_4,zf-C2H2,C1_3,zf-H2C2_2,HypA,zf-DNA_Pol,DUF2752,Rad50_zn_hook,Zn_Tnp_IS1595,zf-Mss51,Terminase_GpA,zf-C2H2_6,Prok-RING_1,zf-H2C2_5,DUF2225,DZR,Elf1,CxxC_CxxC_SSSS,zf-C2H2_2 |
| Q9P2Y4 | Nearest Neighbor (50–70%) | 53.0% | zf-C2H2_4,zf-C2H2,C1_3,zf-H2C2_2,HypA,zf-DNA_Pol,DUF2752,Rad50_zn_hook,Zn_Tnp_IS1595,zf-Mss51,Terminase_GpA,zf-C2H2_6,Prok-RING_1,zf-H2C2_5,DUF2225,DZR,Elf1,CxxC_CxxC_SSSS,zf-C2H2_2 |
| M0R087 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-RING_3,zf-C2H2,zf-H2C2_2,zf-C2H2_6 |