JASPAR motif

MA0620.2

Source: JASPAR

Download MEME Scan DNA Open in JASPAR

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Matrix 18 positions

Position	A	C	G	T
1	0.2565	0.2386	0.2363	0.2686
2	0.2623	0.2377	0.2508	0.2492
3	0.4009	0.1295	0.2044	0.2652
4	0.2720	0.0758	0.4674	0.1848
5	0.2049	0.0769	0.6987	0.0195
6	0.0313	0.0711	0.0400	0.8576
7	0.0021	0.9918	0.0043	0.0018
8	0.9820	0.0057	0.0032	0.0091
9	0.0023	0.7788	0.0145	0.2044
10	0.2045	0.0145	0.7788	0.0023
11	0.0091	0.0032	0.0057	0.9820
12	0.0018	0.0043	0.9918	0.0020
13	0.8578	0.0399	0.0711	0.0312
14	0.0195	0.6987	0.0769	0.2048
15	0.1848	0.4673	0.0758	0.2721
16	0.2653	0.2044	0.1295	0.4008
17	0.2492	0.2507	0.2377	0.2624
18	0.2687	0.2363	0.2386	0.2565

TFs using this motif 12 linked TF records

6 known/direct, 6 nearest-neighbor >70%, 0 nearest-neighbor 50–70%, 0 structure-derived. Showing all 12 assignments.

TF record	Motif assignment	Identity	PFAM Families
A0A087WXU1	Known		DUF3313,MAS20
A0A0H3W5T2	Known		HLH,UPF0564,DUF3371
A0A8F9W6H4	Known		HLH
C9JBI8	Known		DUF3313,HLH,5-FTHF_cyc-lig,Ribophorin_I
E9PKJ8	Known		DUF3313,MAS20
O75030	Known		HLH,DUF3371,DUF3313,5-FTHF_cyc-lig,Ribophorin_I
A8K5K3	Nearest Neighbor (>70%)	98.6%	HLH,DUF3371,DUF3313,RNA_pol_Rpb4,5-FTHF_cyc-lig
A0A8I5KRZ6	Nearest Neighbor (>70%)	98.3%	Ribophorin_I,DUF3313,HLH,RNA_pol_Rpb4
B4DNC7	Nearest Neighbor (>70%)	98.3%	HLH,DUF3371,DUF3313,5-FTHF_cyc-lig,Ribophorin_I
A0A8I5KSZ4	Nearest Neighbor (>70%)	97.2%	HLH,DUF3371,DUF3313,RNA_pol_Rpb4,5-FTHF_cyc-lig,Ribophorin_I
A0A8I5KTU3	Nearest Neighbor (>70%)	94.1%	HLH,5-FTHF_cyc-lig,DUF3371
C9J845	Nearest Neighbor (>70%)	73.7%	Ribophorin_I