JASPAR motif
MA0752.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.1657 | 0.1755 | 0.2382 | 0.4205 |
| 2 | 0.4300 | 0.4694 | 0.1001 | 0.0005 |
| 3 | 0.0002 | 0.9075 | 0.0000 | 0.0922 |
| 4 | 0.9982 | 0.0005 | 0.0003 | 0.0010 |
| 5 | 0.0124 | 0.0082 | 0.0307 | 0.9487 |
| 6 | 0.0172 | 0.9816 | 0.0002 | 0.0010 |
| 7 | 0.0030 | 0.9970 | 0.0000 | 0.0000 |
| 8 | 0.0000 | 0.9997 | 0.0003 | 0.0000 |
| 9 | 0.9980 | 0.0013 | 0.0003 | 0.0005 |
| 10 | 0.0000 | 0.0023 | 0.0000 | 0.9977 |
| 11 | 0.9980 | 0.0020 | 0.0000 | 0.0000 |
| 12 | 0.9985 | 0.0005 | 0.0008 | 0.0003 |
| 13 | 0.0010 | 0.0015 | 0.0000 | 0.9975 |
| 14 | 0.9791 | 0.0042 | 0.0107 | 0.0060 |
| 15 | 0.2681 | 0.3222 | 0.1552 | 0.2545 |
| 16 | 0.0424 | 0.2019 | 0.1945 | 0.5612 |
| 17 | 0.1976 | 0.6507 | 0.0230 | 0.1287 |
TFs using this motif
4 known/direct, 5 nearest-neighbor >70%, 3 nearest-neighbor 50–70%, 0 structure-derived. Showing all 12 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| B4DPW2 | Known | zf-C2H2_4,zf-C2H2,CHORD,FYVE,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_2,zf-C2HC_2,zf-C2H2_6 | |
| G3V4E6 | Known | zf-C2H2_4,zf-C2H2,CHORD,FYVE,zf-C2H2_jaz,zf-met,zf-H2C2_2,CxxC_CxxC_SSSS,zf-C2H2_2,zf-C2HC_2,zf-C2H2_6 | |
| J3KNQ6 | Known | zf-C2H2_4,zf-C2H2,CHORD,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2HC_2 | |
| Q86VK4 | Known | zf-C2H2_4,zf-C2H2,CHORD,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2HC_2 | |
| B2RCP6 | Nearest Neighbor (>70%) | 99.7% | zf-C2H2_4,zf-C2H2,CHORD,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2HC_2 |
| Q53FM1 | Nearest Neighbor (>70%) | 99.7% | zf-C2H2_4,zf-C2H2,CHORD,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2HC_2 |
| B4DPE9 | Nearest Neighbor (>70%) | 97.6% | zf-C2H2_4,zf-C2H2,CHORD,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2HC_2 |
| B4E1G8 | Nearest Neighbor (>70%) | 90.1% | zf-C2H2_4,zf-C2H2,CHORD,zf-C2H2_jaz,zf-met,zf-H2C2_2 |
| G3V4H7 | Nearest Neighbor (>70%) | 88.9% | zf-C2H2_4,zf-C2H2,CHORD,zf-C2H2_jaz,zf-met,zf-H2C2_2,DUF1528,zf-C2H2_2,zf-C2HC_2,zf-C2H2_6 |
| B4DHU8 | Nearest Neighbor (50–70%) | 52.9% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,Ogr_Delta,zf-TRAF,zf-met,CCAP,zf-H2C2_2,CopK |
| E7EX64 | Nearest Neighbor (50–70%) | 52.9% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,Ogr_Delta,zf-TRAF,zf-met,zf-H2C2_2,CopK |
| B4DGI1 | Nearest Neighbor (50–70%) | 50.3% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,CopK,zf-C2H2_6 |