JASPAR motif

MA0775.1

Source: JASPAR

Download MEME Scan DNA Open in JASPAR

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Matrix 8 positions

Position	A	C	G	T
1	0.2604	0.0084	0.2495	0.4816
2	0.0562	0.0463	0.0314	0.8661
3	0.0000	0.0008	0.9992	0.0000
4	0.9314	0.0026	0.0591	0.0069
5	0.0072	0.9701	0.0011	0.0217
6	0.9202	0.0010	0.0601	0.0186
7	0.1316	0.1471	0.5581	0.1631
8	0.1340	0.3269	0.4031	0.1361

TFs using this motif 19 linked TF records

1 known/direct, 11 nearest-neighbor >70%, 7 nearest-neighbor 50–70%, 0 structure-derived. Showing all 19 assignments.

TF record	Motif assignment	Identity	PFAM Families
Q99687	Known		Homeobox,KNOX2,Homeobox_KN
H0YMV2	Nearest Neighbor (>70%)	99.5%	Homeobox,Homeobox_KN
Q59FK5	Nearest Neighbor (>70%)	99.5%	Homeobox,Homeobox_KN
Q8TCW1	Nearest Neighbor (>70%)	93.3%	Homeobox,Homeobox_KN
A8K0S8	Nearest Neighbor (>70%)	89.8%	Homeobox,Homeobox_KN
A6NDR6	Nearest Neighbor (>70%)	89.1%	Homeobox,Homeobox_KN
H3BLU4	Nearest Neighbor (>70%)	85.0%	Homeobox,Homeobox_KN,Homez
A0A8V8TQU6	Nearest Neighbor (>70%)	74.4%	Homeobox,Homeobox_KN
U3KQI2	Nearest Neighbor (>70%)	74.4%	Homeobox,Homeobox_KN,Gag_p24
B7Z6F6	Nearest Neighbor (>70%)	72.9%	Homeobox,Homeobox_KN
B7Z4B3	Nearest Neighbor (>70%)	71.7%	Homeobox,Homeobox_KN
B7Z272	Nearest Neighbor (>70%)	71.2%	Homeobox,Homeobox_KN
B3KPD8	Nearest Neighbor (50–70%)	69.8%	Homeobox,Homeobox_KN
B2RC57	Nearest Neighbor (50–70%)	64.4%	Homeobox,Homeobox_KN
A0A8V8TPB7	Nearest Neighbor (50–70%)	61.9%	Homeobox,DUF4332,Homeobox_KN
A8K5V0	Nearest Neighbor (50–70%)	51.7%	CENP-B_N,Sec15,DUF1319,HTH_3,UCH,Homez,HTH_26,Homeobox,HTH_19,PBC,Homeobox_KN
A0A1U9X8A1	Nearest Neighbor (50–70%)	50.0%	CENP-B_N,HTH_3,UCH,Homez,HTH_26,Homeobox,HTH_19,PBC,Homeobox_KN
A0A1U9X8A2	Nearest Neighbor (50–70%)	50.0%	CENP-B_N,HTH_3,UCH,Homez,HTH_26,Homeobox,HTH_19,PBC,Homeobox_KN
B7Z4A9	Nearest Neighbor (50–70%)	50.0%	Sec15,DUF1319,Homez,IMD,Homeobox,HTH_19,PBC,Homeobox_KN