JASPAR motif

MA0799.1

Source: JASPAR

Download MEME Scan DNA Open in JASPAR

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Matrix 16 positions

Position	A	C	G	T
1	0.1885	0.3569	0.2479	0.2067
2	0.1227	0.0009	0.8630	0.0134
3	0.0285	0.0260	0.0139	0.9317
4	0.3298	0.1364	0.0061	0.5277
5	0.3087	0.0339	0.4881	0.1693
6	0.0003	0.8499	0.0016	0.1482
7	0.0001	0.7152	0.0036	0.2810
8	0.7891	0.0654	0.0715	0.0739
9	0.0548	0.0377	0.0297	0.8778
10	0.1635	0.0038	0.8326	0.0001
11	0.2361	0.0296	0.7287	0.0057
12	0.1207	0.5184	0.0088	0.3521
13	0.5637	0.0080	0.1129	0.3154
14	0.9652	0.0140	0.0183	0.0024
15	0.0036	0.9619	0.0012	0.0333
16	0.1610	0.2785	0.4113	0.1492

TFs using this motif 6 linked TF records

2 known/direct, 0 nearest-neighbor >70%, 4 nearest-neighbor 50–70%, 0 structure-derived. Showing all 6 assignments.

TF record	Motif assignment	Identity	PFAM Families
B4DZB7	Known		RFX_DNA_binding,Pox_D5
Q33E94	Known		RFX_DNA_binding,Pox_D5
F6UGA0	Nearest Neighbor (50–70%)	63.4%	RFX_DNA_binding,Pox_D5,RFX1_trans_act
D6RAX4	Nearest Neighbor (50–70%)	51.6%	RFX_DNA_binding
E9PDA6	Nearest Neighbor (50–70%)	51.6%	RFX_DNA_binding
Q6ZNB4	Nearest Neighbor (50–70%)	50.0%	RFX_DNA_binding