TF-to-motif prediction search
Search ModCREDB
Primary prediction is the highest-priority evidence assigned to a UniProt sequence record in the ModCREDB hierarchy. A record can also contain additional lower-priority motif assignments on its TF page. UniProtKB reviewed means a manually curated Swiss-Prot entry; it is not a ModCREDB manual-review label.
Motif recordsShowing 1-1 of 1 matching motif file
| Motif ID | Source | DNA binding | Width | TF records | Linked evidence | Actions |
|---|---|---|---|---|---|---|
| MA0065.1 | JASPAR | CCAGGGGTCAAAGGTCATCG | 20 | 83 linked TF records | Known, Nearest Neighbor (>70%), Nearest Neighbor (50-70%) | Motif page · Scan |
UniProt sequence-record resultsShowing 1-60 of 83 matching records · page 1 of 2
| UniProt | Gene | Protein | Primary prediction | PWMs | 3D | PFAM |
|---|---|---|---|---|---|---|
| P19793 UniProtKB reviewed (Swiss-Prot) |
RXRA | Retinoic acid receptor RXR-alpha (Nuclear receptor subfamily 2 group B member 1) (Retinoid X receptor alpha) | Known | 21 | 1 | Nuc_recep-AF1,Hormone_recep,zf-C4 |
| P37231 UniProtKB reviewed (Swiss-Prot) |
PPARG | Peroxisome proliferator-activated receptor gamma (PPAR-gamma) (Nuclear receptor subfamily 1 group C member 3) | Known | 9 | 1 | PPARgamma_N,Hormone_recep,zf-C4 |
| A0A3P3ZKM0 | PPARG2D5 | Peroxisome proliferator-activated receptor gamma (PPAR-gamma) (Nuclear receptor subfamily 1 group C member 3) | Known | 1 | 1 | PPARgamma_N,DUF1319,zf-C4 |
| A0A5F9ZHH6 | RXRA | Retinoic acid receptor RXR (Nuclear receptor subfamily 2 group B member) | Known | 1 | 1 | Nuc_recep-AF1,Hormone_recep,zf-C4 |
| F1D8Q5 | NR2B1 | Retinoic acid receptor RXR (Nuclear receptor subfamily 2 group B member) | Known | 1 | 1 | Nuc_recep-AF1,Hormone_recep,zf-C4 |
| Q4W4C7 | PPARG | Peroxisome proliferator-activated receptor gamma (PPAR-gamma) (Nuclear receptor subfamily 1 group C member 3) | Known | 1 | 1 | PPARgamma_N,DUF1319,zf-C4 |
| Q6P3U7 | RXRA | Retinoic acid receptor RXR (Nuclear receptor subfamily 2 group B member) | Known | 1 | 1 | Med3,Nuc_recep-AF1,Hormone_recep,zf-C4 |
| B6DP74 | ESR1 | Estrogen receptor alpha splice variant | Nearest Neighbor (>70%) | 110 | 1 | zf-C4 |
| M0R229 | NR1H2 | Nuclear receptor subfamily 1 group H member 2 | Nearest Neighbor (>70%) | 110 | 1 | zf-C4 |
| B5TZ78 | ESR1 | Estrogen receptor alpha splice variant | Nearest Neighbor (>70%) | 106 | 1 | zf-C4 |
| A0A8V8TPV9 | NR4A2 | Nuclear receptor subfamily 4 group A member 2 | Nearest Neighbor (>70%) | 95 | 1 | zf-C4 |
| B5TKC2 | ESR1 | Estrogen receptor (ER-alpha) (Estradiol receptor) (Nuclear receptor subfamily 3 group A member 1) | Nearest Neighbor (>70%) | 93 | 1 | SapB_2,ESR1_C,zf-C4 |
| C9E0E9 | ESR1 | Estrogen receptor alpha 3*,4,5,6,7,8*/1032 isoform | Nearest Neighbor (>70%) | 93 | 1 | zf-C2H2,zf-C4 |
| Q3SB16 | unknown | Retinoic acid receptor beta (Nuclear receptor subfamily 1 group B member 2) | Nearest Neighbor (>70%) | 91 | 1 | FadA,DUF1140,zf-C4 |
| C0JKD7 | AR | Androgen receptor splice variant 6 | Nearest Neighbor (>70%) | 89 | 1 | Hid1,Androgen_recep,DUF1764,Spt20,Neur_chan_memb,Suf,eIF-3_zeta,Med15,NARP1,zf-C4 |
| B6ZGT7 | NR2C1 | Nuclear receptor subfamily 2, group C isoform | Nearest Neighbor (>70%) | 87 | 1 | DUF3892,DUF2318,zf-C4 |
| H0YLS5 | RORA | RAR related orphan receptor A | Nearest Neighbor (>70%) | 87 | 1 | zf-C4 |
| A0A087WUK4 | NR2C1 | Nuclear receptor subfamily 2 group C member 1 | Nearest Neighbor (>70%) | 86 | 1 | DUF3892,DUF2318,Hormone_recep,zf-C4 |
| A0A679EM68 | ESR1 | Estrogen receptor (ER-alpha) (Estradiol receptor) (Nuclear receptor subfamily 3 group A member 1) | Nearest Neighbor (>70%) | 86 | 1 | Oest_recep,zf-C4 |
| A0A804HJN2 | PPARG | Peroxisome proliferator-activated receptor gamma (PPAR-gamma) (Nuclear receptor subfamily 1 group C member 3) | Nearest Neighbor (>70%) | 86 | 1 | PPARgamma_N,zf-C4 |
| O60587 | FTF | Alpha1-fetoprotein transcription factor short variant | Nearest Neighbor (>70%) | 84 | 1 | zf-RING_2,Hormone_recep,zf-C4 |
| B7Z6J2 | unknown | cDNA FLJ61401, highly similar to Retinoic acid receptor RXR-beta | Nearest Neighbor (>70%) | 83 | 1 | Nuc_recep-AF1,zf-C4 |
| C0L927 | ESR1 | Estrogen receptor alpha delta 4,5,7 isoform | Nearest Neighbor (>70%) | 83 | 1 | C1_3,zf-C4 |
| Q6PHZ7 | NR2C2 | NR2C2 protein | Nearest Neighbor (>70%) | 81 | 1 | DUF1254,Flagellin_N,Hormone_recep,zf-C4 |
| F1DAM0 | NR5A1 | Steroidogenic factor 1 (Nuclear receptor subfamily 5 group A member 1) | Nearest Neighbor (>70%) | 80 | 1 | Hormone_recep,UPF0547,zf-C3HC4_2,zf-P11,zf-C4 |
| C8CJL3 | ESR1 | Estrogen receptor alpha delta 3*,4,5,6,7,8*/984 isoform | Nearest Neighbor (>70%) | 79 | 1 | Ribosomal_L37ae,zf-C4 |
| C9E0F3 | ESR1 | Estrogen receptor alpha 3*,4,5,6,7,8*/984 isoform | Nearest Neighbor (>70%) | 79 | 1 | C1_3,zf-C4 |
| B6DP71 | ESR1 | Estrogen receptor alpha splice variant | Nearest Neighbor (>70%) | 74 | 1 | Ribosomal_L37ae,C1_3,DUF3011,zf-C4 |
| B6DP73 | ESR1 | Estrogen receptor alpha splice variant | Nearest Neighbor (>70%) | 74 | 1 | zf-C4 |
| B6DU68 | ESR1 | Estrogen receptor alpha delta 4,7*,8*/581 hypothalamic isoform | Nearest Neighbor (>70%) | 72 | 1 | Hormone_recep,zf-C4 |
| C0LJA7 | ESR1 | Estrogen receptor alpha delta 3*4,5*,7 isoform | Nearest Neighbor (>70%) | 72 | 1 | Hormone_recep,zf-P11,zf-C4 |
| A0A8I5KUH8 | RARB | Retinoic acid receptor beta (Nuclear receptor subfamily 1 group B member 2) | Nearest Neighbor (>70%) | 71 | 1 | FadA,DUF1140,Topoisom_I_N,zf-C4 |
| G8JLB0 | NR1H4 | Nuclear receptor subfamily 1 group H member 4 | Nearest Neighbor (>70%) | 67 | 1 | zf-C4 |
| B5TZ79 | ESR1 | Estrogen receptor (ER-alpha) (Estradiol receptor) (Nuclear receptor subfamily 3 group A member 1) | Nearest Neighbor (>70%) | 65 | 1 | ESR1_C,zf-C4 |
| B6ZGR7 | NR1A2 | Thyroid hormone receptor beta isoform | Nearest Neighbor (>70%) | 65 | 1 | zf-C4 |
| A0A0C4DFP5 | RORA | RAR related orphan receptor A | Nearest Neighbor (>70%) | 63 | 1 | Hormone_recep,zf-C4 |
| A0A0C4DG53 | RORA | RAR related orphan receptor A | Nearest Neighbor (>70%) | 63 | 1 | Hormone_recep,zf-C4 |
| F1DAL0 | NR1F1 | Thyroid hormone nuclear receptor alpha | Nearest Neighbor (>70%) | 63 | 1 | Hormone_recep,zf-C4 |
| B6ZGS6 | NR1F3 | Retinoid-related orphan receptor gamma | Nearest Neighbor (>70%) | 62 | 1 | Hormone_recep,zf-C4 |
| B6ZGU8 | NR5A1 | Steroidogenic factor 1 (Nuclear receptor subfamily 5 group A member 1) | Nearest Neighbor (>70%) | 62 | 1 | Hormone_recep,UPF0547,zf-C3HC4_2,zf-P11,zf-C4 |
| B0ZBF8 | NR3C2 | UniProtKB entry deleted | Nearest Neighbor (>70%) | 62 | 0 | zf-C4 |
| B6ZGS4 | NR1F1 | Retinoid-related orphan receptor alpha | Nearest Neighbor (>70%) | 61 | 1 | Hormone_recep,zf-C4 |
| B2RDT1 | unknown | cDNA, FLJ96754, highly similar to Homo sapiens RAR-related orphan receptor C (RORC), mRNA | Nearest Neighbor (>70%) | 59 | 1 | Hormone_recep,zf-C4 |
| C9J2C8 | NR1H3 | Nuclear receptor subfamily 1 group H member 3 | Nearest Neighbor (>70%) | 59 | 1 | zf-C4 |
| C9JDI9 | NR6A1 | Nuclear receptor subfamily 6 group A member 1 | Nearest Neighbor (>70%) | 59 | 1 | zf-C4 |
| Q53FZ4 | unknown | RAR-related orphan receptor C isoform a variant | Nearest Neighbor (>70%) | 59 | 1 | Hormone_recep,zf-C4 |
| B3KUU9 | unknown | cDNA FLJ40675 fis, clone THYMU2021714, highly similar to NUCLEAR RECEPTOR ROR-GAMMA | Nearest Neighbor (>70%) | 58 | 1 | Hormone_recep,zf-C4 |
| Q6AW80 | DKFZp779O0162 | Uncharacterized protein DKFZp779O0162 | Nearest Neighbor (>70%) | 58 | 1 | zf-C4 |
| C9J4R0 | NR1H3 | Nuclear receptor subfamily 1 group H member 3 | Nearest Neighbor (>70%) | 56 | 1 | zf-C4 |
| C9JCS0 | NR1H3 | Nuclear receptor subfamily 1 group H member 3 | Nearest Neighbor (>70%) | 56 | 1 | zf-C4 |
| C9JJ16 | NR1H3 | Nuclear receptor subfamily 1 group H member 3 | Nearest Neighbor (>70%) | 56 | 1 | zf-C4 |
| B6ZGS5 | NR1F2 | Retinoid-related orphan receptor beta | Nearest Neighbor (>70%) | 55 | 1 | DUF4047,Hormone_recep,zf-C4 |
| C9JBS2 | NR1H3 | Nuclear receptor subfamily 1 group H member 3 | Nearest Neighbor (>70%) | 55 | 1 | zf-C4 |
| F1D8R9 | NR5A2 | Liver nuclear receptor homolog-1 variant 2 | Nearest Neighbor (>70%) | 53 | 1 | zf-RING_2,Hormone_recep,zf-C4 |
| B6ZGU9 | NR5A2 | Nuclear receptor subfamily 5, group A | Nearest Neighbor (>70%) | 52 | 1 | zf-RING_2,Hormone_recep,zf-C4 |
| Q9UEC0 | unknown | FTZ-F1 related protein | Nearest Neighbor (>70%) | 52 | 1 | zf-RING_2,Hormone_recep,zf-C4 |
| B4E2M6 | unknown | cDNA FLJ54621, highly similar to Orphan nuclear receptor NR5A2 | Nearest Neighbor (>70%) | 51 | 1 | zf-RING_2,Hormone_recep,zf-C4 |
| B7Z6X3 | unknown | cDNA FLJ50703, highly similar to Retinoic acid receptor RXR-beta | Nearest Neighbor (>70%) | 50 | 1 | Hormone_recep,zf-C4 |
| A0A125SXW0 | ESR1 | Estrogen receptor (ER-alpha) (Estradiol receptor) (Nuclear receptor subfamily 3 group A member 1) | Nearest Neighbor (>70%) | 48 | 1 | Oest_recep,zf-C4 |
| A0A125SXV7 | ESR1 | Estrogen receptor (ER-alpha) (Estradiol receptor) (Nuclear receptor subfamily 3 group A member 1) | Nearest Neighbor (>70%) | 47 | 1 | Oest_recep,zf-C4 |