CisBP motif
M02007_2.00
Source: CisBP
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.1808 | 0.2865 | 0.2345 | 0.2982 |
| 2 | 0.3669 | 0.1139 | 0.1297 | 0.3896 |
| 3 | 0.3354 | 0.1878 | 0.2586 | 0.2182 |
| 4 | 0.1028 | 0.3482 | 0.2112 | 0.3379 |
| 5 | 0.8417 | 0.1128 | 0.0317 | 0.0138 |
| 6 | 0.0000 | 0.0001 | 0.9986 | 0.0013 |
| 7 | 0.9842 | 0.0121 | 0.0029 | 0.0008 |
| 8 | 0.0001 | 0.0075 | 0.0213 | 0.9711 |
| 9 | 0.1120 | 0.4919 | 0.1941 | 0.2020 |
| 10 | 0.1544 | 0.2471 | 0.2650 | 0.3335 |
TFs using this motif
0 known/direct, 0 nearest-neighbor >70%, 6 nearest-neighbor 50–70%, 0 structure-derived. Showing all 6 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| A0A8Q3SIT6 | Nearest Neighbor (50–70%) | 60.7% | Elf1,DUF2387,ArfGap,CxxC_CxxC_SSSS,eIF-5_eIF-2B,TF_Zn_Ribbon,Prim_Zn_Ribbon,DZR,GATA,A2L_zn_ribbon |
| Q16365 | Nearest Neighbor (50–70%) | 60.7% | Elf1,DUF2387,BaffR-Tall_bind,Golgin_A5,ArfGap,CxxC_CxxC_SSSS,eIF-5_eIF-2B,GATA-N,TF_Zn_Ribbon,Zn_Tnp_IS1595,Prim_Zn_Ribbon,DZR,GATA |
| Q53EU2 | Nearest Neighbor (50–70%) | 60.7% | Elf1,DUF2387,CxxC_CxxC_SSSS,eIF-5_eIF-2B,GATA-N,TF_Zn_Ribbon,Zn_Tnp_IS1595,Prim_Zn_Ribbon,DZR,GATA |
| R9UV10 | Nearest Neighbor (50–70%) | 52.9% | zf-ribbon_3,CxxC_CxxC_SSSS,eIF-5_eIF-2B,TF_Zn_Ribbon,GATA,A2L_zn_ribbon |
| B5MCP8 | Nearest Neighbor (50–70%) | 50.0% | ArfGap,zf-trcl,TF_Zn_Ribbon,RRN7,DZR,GATA,NOB1_Zn_bind |
| P0C6A0 | Nearest Neighbor (50–70%) | 50.0% | DZR,ArfGap,GATA |