CisBP motif
M02012_2.00
Source: CisBP
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.4811 | 0.2592 | 0.1483 | 0.1113 |
| 2 | 0.3157 | 0.6838 | 0.0003 | 0.0003 |
| 3 | 0.0002 | 0.0002 | 0.9993 | 0.0002 |
| 4 | 0.9993 | 0.0002 | 0.0002 | 0.0002 |
| 5 | 0.0002 | 0.0002 | 0.0002 | 0.9993 |
| 6 | 0.0002 | 0.9993 | 0.0002 | 0.0002 |
| 7 | 0.0002 | 0.0002 | 0.7069 | 0.2926 |
| 8 | 0.5158 | 0.2258 | 0.1614 | 0.0970 |
TFs using this motif
0 known/direct, 0 nearest-neighbor >70%, 6 nearest-neighbor 50–70%, 0 structure-derived. Showing all 6 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| Q53EU2 | Nearest Neighbor (50–70%) | 57.5% | Elf1,DUF2387,CxxC_CxxC_SSSS,eIF-5_eIF-2B,GATA-N,TF_Zn_Ribbon,Zn_Tnp_IS1595,Prim_Zn_Ribbon,DZR,GATA |
| A0A8Q3SIT6 | Nearest Neighbor (50–70%) | 56.6% | Elf1,DUF2387,ArfGap,CxxC_CxxC_SSSS,eIF-5_eIF-2B,TF_Zn_Ribbon,Prim_Zn_Ribbon,DZR,GATA,A2L_zn_ribbon |
| Q16365 | Nearest Neighbor (50–70%) | 53.3% | Elf1,DUF2387,BaffR-Tall_bind,Golgin_A5,ArfGap,CxxC_CxxC_SSSS,eIF-5_eIF-2B,GATA-N,TF_Zn_Ribbon,Zn_Tnp_IS1595,Prim_Zn_Ribbon,DZR,GATA |
| R9UV10 | Nearest Neighbor (50–70%) | 53.3% | zf-ribbon_3,CxxC_CxxC_SSSS,eIF-5_eIF-2B,TF_Zn_Ribbon,GATA,A2L_zn_ribbon |
| B5MCP8 | Nearest Neighbor (50–70%) | 53.1% | ArfGap,zf-trcl,TF_Zn_Ribbon,RRN7,DZR,GATA,NOB1_Zn_bind |
| P0C6A0 | Nearest Neighbor (50–70%) | 53.1% | DZR,ArfGap,GATA |