CisBP motif
M08043_2.00
Source: CisBP
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.1222 | 0.4163 | 0.1810 | 0.2805 |
| 2 | 0.0362 | 0.0000 | 0.0000 | 0.9638 |
| 3 | 0.0000 | 0.0000 | 0.0000 | 1.0000 |
| 4 | 0.1086 | 0.8597 | 0.0136 | 0.0181 |
| 5 | 0.0000 | 0.9367 | 0.0000 | 0.0633 |
| 6 | 0.0633 | 0.4525 | 0.0000 | 0.4842 |
| 7 | 0.2670 | 0.0000 | 0.7330 | 0.0000 |
| 8 | 0.0136 | 0.0000 | 0.9050 | 0.0814 |
| 9 | 0.6923 | 0.2715 | 0.0000 | 0.0362 |
| 10 | 1.0000 | 0.0000 | 0.0000 | 0.0000 |
| 11 | 0.3303 | 0.0814 | 0.3982 | 0.1900 |
TFs using this motif
3 known/direct, 15 nearest-neighbor >70%, 5 nearest-neighbor 50–70%, 0 structure-derived. Showing all 23 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| A0A7I2V2T1 | Known | Tropomyosin_1,STAT_int,Fib_alpha,MerR-DNA-bind,STAT_bind,eIF3_N,STAT_alpha,DUF342,Baculo_PEP_C,TMF_DNA_bd,DUF2730,Syntaxin-6_N | |
| A0A7I2V395 | Known | Tropomyosin_1,STAT_int,Fib_alpha,MerR-DNA-bind,STAT_bind,eIF3_N,STAT_alpha,DUF342,Baculo_PEP_C,SH2,Syntaxin-6_N | |
| A0A7I2V4F6 | Known | Tropomyosin_1,STAT_int,Fib_alpha,DUF3373,MerR-DNA-bind,STAT_bind,eIF3_N,STAT_alpha,DUF342,Arabinose_Iso_C,Baculo_PEP_C,TMF_DNA_bd,DUF2730,Syntaxin-6_N | |
| B4DNP0 | Nearest Neighbor (>70%) | 99.5% | Tropomyosin_1,Fib_alpha,MerR-DNA-bind,MIF4G_like_2,STAT_bind,eIF3_N,STAT_alpha,DUF342,DUF892,Baculo_PEP_C,SH2,DUF2730,Syntaxin-6_N |
| B5BTZ6 | Nearest Neighbor (>70%) | 99.4% | STAT_int,Fib_alpha,MerR-DNA-bind,STAT_bind,eIF3_N,STAT_alpha,DUF342,Baculo_PEP_C,SH2,Syntaxin-6_N |
| A0A7I2V2G1 | Nearest Neighbor (>70%) | 99.3% | Tropomyosin_1,STAT_int,Fib_alpha,MerR-DNA-bind,STAT_bind,eIF3_N,STAT_alpha,DUF342,Baculo_PEP_C,SH2,Syntaxin-6_N |
| B4DVR6 | Nearest Neighbor (>70%) | 99.3% | Tropomyosin_1,Fib_alpha,MerR-DNA-bind,STAT_bind,eIF3_N,STAT_alpha,DUF342,Baculo_PEP_C,SH2,DUF2730,Syntaxin-6_N |
| B7ZA24 | Nearest Neighbor (>70%) | 99.2% | Tropomyosin_1,Fib_alpha,MerR-DNA-bind,STAT_bind,eIF3_N,STAT_alpha,DUF342,Baculo_PEP_C,SH2,DUF2730,Syntaxin-6_N |
| A0A7I2YQD2 | Nearest Neighbor (>70%) | 99.1% | Tropomyosin_1,STAT_int,Fib_alpha,MerR-DNA-bind,STAT_bind,eIF3_N,STAT_alpha,DUF342,Baculo_PEP_C,SH2,Syntaxin-6_N |
| A0A7I2V4R2 | Nearest Neighbor (>70%) | 99.0% | Tropomyosin_1,STAT_int,Fib_alpha,MerR-DNA-bind,STAT_bind,eIF3_N,STAT_alpha,DUF342,Baculo_PEP_C,SH2,Syntaxin-6_N |
| A0A7I2V5N9 | Nearest Neighbor (>70%) | 98.9% | Tropomyosin_1,STAT_int,Fib_alpha,MerR-DNA-bind,STAT_bind,eIF3_N,STAT_alpha,DUF342,Baculo_PEP_C,SH2,Syntaxin-6_N |
| A0A7I2V444 | Nearest Neighbor (>70%) | 98.8% | Tropomyosin_1,STAT_int,Fib_alpha,MerR-DNA-bind,STAT_bind,eIF3_N,STAT_alpha,DUF342,Baculo_PEP_C,SH2,Syntaxin-6_N |
| A0A7I2YQI1 | Nearest Neighbor (>70%) | 98.6% | Tropomyosin_1,STAT_int,Fib_alpha,MerR-DNA-bind,STAT_bind,eIF3_N,STAT_alpha,DUF342,Baculo_PEP_C,SH2,Syntaxin-6_N |
| A0A7I2YQR5 | Nearest Neighbor (>70%) | 98.5% | Tropomyosin_1,STAT_int,Fib_alpha,MerR-DNA-bind,STAT_bind,eIF3_N,STAT_alpha,DUF342,Baculo_PEP_C,SH2,Syntaxin-6_N |
| A0A7I2V4C8 | Nearest Neighbor (>70%) | 96.1% | Tropomyosin_1,STAT_int,Fib_alpha,MerR-DNA-bind,STAT_bind,eIF3_N,STAT_alpha,DUF342,Baculo_PEP_C,SH2,Syntaxin-6_N |
| A0A7I2V4R3 | Nearest Neighbor (>70%) | 95.8% | Tropomyosin_1,STAT_int,Fib_alpha,MerR-DNA-bind,STAT_bind,eIF3_N,STAT_alpha,DUF342,Baculo_PEP_C,SH2,Syntaxin-6_N |
| A0A7I2V3V0 | Nearest Neighbor (>70%) | 95.7% | Tropomyosin_1,STAT_int,Fib_alpha,MerR-DNA-bind,STAT_bind,eIF3_N,STAT_alpha,DUF342,Baculo_PEP_C,SH2,Syntaxin-6_N |
| A0A7I2V552 | Nearest Neighbor (>70%) | 95.7% | STAT_int,STAT_bind,STAT_alpha,SH2,HD_4 |
| B4DVP7 | Nearest Neighbor (50–70%) | 54.3% | STAT_alpha,SH2,STAT_bind |
| A0A669KB68 | Nearest Neighbor (50–70%) | 53.0% | STAT_int,NPV_P10,STAT_bind,STAT_alpha,SH2,Sec20,STAT1_TAZ2bind |
| A0A8V8TN81 | Nearest Neighbor (50–70%) | 51.2% | STAT_int,NPV_P10,STAT_bind,STAT_alpha,SH2,Sec20,STAT1_TAZ2bind |
| B4DV04 | Nearest Neighbor (50–70%) | 50.5% | STAT_int,NPV_P10,STAT_bind,STAT_alpha,CRC_subunit,SH2 |
| E7EPD2 | Nearest Neighbor (50–70%) | 50.3% | STAT_int,STAT_bind,STAT_alpha,Sec20,Alg14 |