JASPAR motif
MA0463.2
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.2932 | 0.2301 | 0.2205 | 0.2562 |
| 2 | 0.1264 | 0.2720 | 0.0983 | 0.5032 |
| 3 | 0.1380 | 0.0204 | 0.7884 | 0.0532 |
| 4 | 0.0313 | 0.9278 | 0.0170 | 0.0239 |
| 5 | 0.0550 | 0.0399 | 0.0110 | 0.8941 |
| 6 | 0.0853 | 0.1040 | 0.1083 | 0.7025 |
| 7 | 0.0080 | 0.0012 | 0.0008 | 0.9900 |
| 8 | 0.0002 | 0.9682 | 0.0007 | 0.0309 |
| 9 | 0.0178 | 0.1093 | 0.5187 | 0.3542 |
| 10 | 0.9337 | 0.0183 | 0.0123 | 0.0358 |
| 11 | 0.0985 | 0.0068 | 0.8758 | 0.0189 |
| 12 | 0.0056 | 0.0142 | 0.9469 | 0.0334 |
| 13 | 0.8552 | 0.0233 | 0.0700 | 0.0515 |
| 14 | 0.8741 | 0.0136 | 0.0210 | 0.0913 |
| 15 | 0.2147 | 0.2615 | 0.0426 | 0.4812 |
| 16 | 0.2222 | 0.1824 | 0.2698 | 0.3256 |
TFs using this motif
1 known/direct, 3 nearest-neighbor >70%, 1 nearest-neighbor 50–70%, 0 structure-derived. Showing all 5 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| P41182 | Known | More than 3 adjacent zinc finger factors{2.3.3} | |
| A5PL18 | Nearest Neighbor (>70%) | 99.8% | zf-C2H2_4,C1_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,DZR,BTB,GAGA,zf-H2C2_5,DUF3342,zf-C2H2_6,DUF776 |
| B4E2L2 | Nearest Neighbor (>70%) | 95.8% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,BTB,GAGA,zf-H2C2_5,DUF3342,zf-C2H2_6,DUF776 |
| B5B0A5 | Nearest Neighbor (>70%) | 91.6% | zf-C2H2_4,zf-C2H2,C1_3,zf-C2H2_jaz,zf-CHY,zf-met,zf-C2H2_6,zf-H2C2_2,CxxC_CxxC_SSSS,BTB,GAGA,zf-H2C2_5,DUF3342,DZR |
| B4DFU5 | Nearest Neighbor (50–70%) | 53.3% | zf-C2H2_4,zf-RING_3,zf-C2H2,Zn_ribbon_recom,DNA_RNApol_7kD,BHD_1,zf-C2H2_jaz,zf-CHY,zf-H2C2_2,Yippee,Chordopox_RPO7,HTH_18,CxxC_CxxC_SSSS,zf-C2H2_6 |