JASPAR motif

MA0486.1

Source: JASPAR

Download MEME Scan DNA Open in JASPAR

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Matrix 15 positions

Position	A	C	G	T
1	0.1111	0.3644	0.2489	0.2756
2	0.0356	0.1156	0.0533	0.7956
3	0.0133	0.0489	0.0356	0.9022
4	0.0044	0.9867	0.0089	0.0000
5	0.0178	0.3156	0.0267	0.6400
6	0.5689	0.0311	0.3956	0.0044
7	0.0000	0.0000	1.0000	0.0000
8	0.8311	0.1067	0.0133	0.0489
9	0.8267	0.0267	0.0667	0.0800
10	0.1956	0.2800	0.3244	0.2000
11	0.1733	0.2756	0.2978	0.2533
12	0.0578	0.0711	0.0400	0.8311
13	0.0356	0.0222	0.0178	0.9244
14	0.0000	0.9689	0.0089	0.0222
15	0.0267	0.3911	0.0800	0.5022

TFs using this motif 8 linked TF records

3 known/direct, 1 nearest-neighbor >70%, 4 nearest-neighbor 50–70%, 0 structure-derived. Showing all 8 assignments.

TF record	Motif assignment	Identity	PFAM Families
A0A087X1F9	Known		HSF_DNA-bind,DUF2365
E9PI02	Known		BRE1,HSF_DNA-bind,DUF2365
Q00613	Known		HSF factors{3.4.1}
Q53HT3	Nearest Neighbor (>70%)	99.4%	HSF_DNA-bind,DUF972,DUF247,NPV_P10,Vert_HS_TF,DUF2365,YlbD_coat,Nnf1
E5RG51	Nearest Neighbor (50–70%)	67.9%	HSF_DNA-bind,AP_endonuc_2_N
B4DJS4	Nearest Neighbor (50–70%)	53.4%	HSF_DNA-bind
E5RK26	Nearest Neighbor (50–70%)	53.4%	HSF_DNA-bind
H0YBT7	Nearest Neighbor (50–70%)	53.0%	HSF_DNA-bind,AP_endonuc_2_N