JASPAR motif

MA0782.1

Source: JASPAR

Download MEME Scan DNA Open in JASPAR

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Matrix 12 positions

Position	A	C	G	T
1	0.0048	0.0119	0.0037	0.9795
2	0.0010	0.0043	0.9941	0.0006
3	0.9901	0.0003	0.0083	0.0012
4	0.0006	0.9990	0.0000	0.0004
5	0.9973	0.0002	0.0021	0.0004
6	0.0010	0.0003	0.9455	0.0532
7	0.0557	0.4548	0.4881	0.0013
8	0.0003	0.0018	0.0008	0.9971
9	0.0156	0.0006	0.9835	0.0003
10	0.0100	0.0053	0.0005	0.9842
11	0.0011	0.9944	0.0038	0.0007
12	0.9633	0.0031	0.0105	0.0230

TFs using this motif 13 linked TF records

3 known/direct, 6 nearest-neighbor >70%, 4 nearest-neighbor 50–70%, 0 structure-derived. Showing all 13 assignments.

TF record	Motif assignment	Identity	PFAM Families
E7EPN6	Known		Homeobox,Homeobox_KN
P55347	Known		Homeobox,Homeobox_KN
Q96I87	Known		Homeobox,Homeobox_KN
Q53GN9	Nearest Neighbor (>70%)	99.7%	Homeobox,Homeobox_KN
Q6PKH2	Nearest Neighbor (>70%)	99.7%	Homeobox,Homeobox_KN
B4DGV5	Nearest Neighbor (>70%)	99.6%	Homeobox,Homeobox_KN
U3KQJ9	Nearest Neighbor (>70%)	76.3%	Homeobox,Homeobox_KN,Homez
H0YMV2	Nearest Neighbor (>70%)	71.8%	Homeobox,Homeobox_KN
Q59FK5	Nearest Neighbor (>70%)	71.8%	Homeobox,Homeobox_KN
B7Z3G7	Nearest Neighbor (50–70%)	63.9%	Myc_N,Homeobox,DUF2890,DUF1053,BSP_II,Homeobox_KN
B7Z9N6	Nearest Neighbor (50–70%)	63.9%	Myc_N,Homeobox,DUF2890,DUF1053,BSP_II,Homeobox_KN
H0YKC7	Nearest Neighbor (50–70%)	50.0%	Homeobox,HA,Homeobox_KN,Homez
Q8IYA7	Nearest Neighbor (50–70%)	50.0%	Period_C,Homeobox_KN,Homez,Homeobox,HA