JASPAR motif
MA0796.1
Source: JASPAR
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.0029 | 0.0014 | 0.0001 | 0.9956 |
| 2 | 0.0007 | 0.0006 | 0.9984 | 0.0003 |
| 3 | 0.9974 | 0.0003 | 0.0023 | 0.0000 |
| 4 | 0.0001 | 0.9990 | 0.0004 | 0.0005 |
| 5 | 0.9965 | 0.0006 | 0.0025 | 0.0004 |
| 6 | 0.0010 | 0.0015 | 0.9271 | 0.0704 |
| 7 | 0.0334 | 0.7797 | 0.1860 | 0.0009 |
| 8 | 0.0001 | 0.0048 | 0.0006 | 0.9945 |
| 9 | 0.0008 | 0.0010 | 0.9975 | 0.0007 |
| 10 | 0.0035 | 0.0019 | 0.0002 | 0.9943 |
| 11 | 0.0027 | 0.9951 | 0.0010 | 0.0013 |
| 12 | 0.9910 | 0.0019 | 0.0035 | 0.0036 |
TFs using this motif
9 known/direct, 0 nearest-neighbor >70%, 9 nearest-neighbor 50–70%, 0 structure-derived. Showing all 18 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| F8VUY0 | Known | Homeobox,Homeobox_KN,Homez | |
| F8VVS9 | Known | Homeobox,Homeobox_KN,Homez | |
| F8VW34 | Known | Homeobox,Homeobox_KN,Homez | |
| F8VWK5 | Known | Homeobox,Homeobox_KN,Homez | |
| F8VX54 | Known | Homeobox,Homeobox_KN,Homez | |
| F8VXG3 | Known | Homeobox,Homeobox_KN,Homez | |
| F8VYL4 | Known | Homeobox,Homeobox_KN,Homez | |
| F8VZH2 | Known | Homeobox,Homeobox_KN,Homez | |
| Q15583 | Known | Homeobox,Homeobox_KN,LRS4,Homez | |
| Q3ZCM9 | Nearest Neighbor (50–70%) | 66.1% | Homeobox,Homeobox_KN,Homez |
| U3KQJ9 | Nearest Neighbor (50–70%) | 61.1% | Homeobox,Homeobox_KN,Homez |
| H0YKC7 | Nearest Neighbor (50–70%) | 54.5% | Homeobox,HA,Homeobox_KN,Homez |
| Q8IYA7 | Nearest Neighbor (50–70%) | 54.5% | Period_C,Homeobox_KN,Homez,Homeobox,HA |
| B7Z3G7 | Nearest Neighbor (50–70%) | 51.4% | Myc_N,Homeobox,DUF2890,DUF1053,BSP_II,Homeobox_KN |
| B7Z9N6 | Nearest Neighbor (50–70%) | 51.4% | Myc_N,Homeobox,DUF2890,DUF1053,BSP_II,Homeobox_KN |
| B4DGV5 | Nearest Neighbor (50–70%) | 50.7% | Homeobox,Homeobox_KN |
| Q53GN9 | Nearest Neighbor (50–70%) | 50.7% | Homeobox,Homeobox_KN |
| Q6PKH2 | Nearest Neighbor (50–70%) | 50.7% | Homeobox,Homeobox_KN |