JASPAR motif

MA0798.1

Source: JASPAR

Download MEME Scan DNA Open in JASPAR

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Matrix 16 positions

Position	A	C	G	T
1	0.1331	0.3520	0.3008	0.2141
2	0.0884	0.0013	0.9053	0.0050
3	0.0138	0.0263	0.0127	0.9471
4	0.1862	0.1205	0.0041	0.6892
5	0.2957	0.0422	0.5340	0.1282
6	0.0027	0.8828	0.0285	0.0860
7	0.0001	0.7782	0.0025	0.2192
8	0.8855	0.0183	0.0266	0.0696
9	0.0663	0.0141	0.0122	0.9074
10	0.2335	0.0022	0.7643	0.0001
11	0.1725	0.0211	0.8055	0.0009
12	0.1558	0.4975	0.0515	0.2952
13	0.7142	0.0044	0.1371	0.1443
14	0.9610	0.0084	0.0257	0.0048
15	0.0057	0.9425	0.0016	0.0503
16	0.1976	0.3196	0.4098	0.0730

TFs using this motif 5 linked TF records

1 known/direct, 2 nearest-neighbor >70%, 2 nearest-neighbor 50–70%, 0 structure-derived. Showing all 5 assignments.

TF record	Motif assignment	Identity	PFAM Families
P48380	Known		RFX_DNA_binding,Pox_D5,RFX1_trans_act
F6UGA0	Nearest Neighbor (>70%)	89.6%	RFX_DNA_binding,Pox_D5,RFX1_trans_act
B7Z7Y7	Nearest Neighbor (>70%)	70.1%	RFX_DNA_binding
B7Z8F5	Nearest Neighbor (50–70%)	69.1%	RFX1_trans_act
P22670	Nearest Neighbor (50–70%)	60.0%	RFX_DNA_binding,Nucleoplasmin,RFX1_trans_act