CisBP motif
M04486_2.00
Source: CisBP
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.0000 | 0.2080 | 0.4877 | 0.3043 |
| 2 | 0.7663 | 0.0978 | 0.1359 | 0.0000 |
| 3 | 0.0030 | 0.9970 | 0.0000 | 0.0000 |
| 4 | 0.0122 | 0.9830 | 0.0000 | 0.0049 |
| 5 | 0.1765 | 0.8010 | 0.0000 | 0.0225 |
| 6 | 0.0000 | 1.0000 | 0.0000 | 0.0000 |
| 7 | 0.0367 | 0.9632 | 0.0000 | 0.0001 |
| 8 | 0.0000 | 0.4185 | 0.0000 | 0.5815 |
| 9 | 0.2854 | 0.0000 | 0.7146 | 0.0000 |
| 10 | 0.0000 | 0.9551 | 0.0000 | 0.0449 |
| 11 | 0.0173 | 0.1465 | 0.0829 | 0.7533 |
| 12 | 0.0000 | 0.0000 | 1.0000 | 0.0000 |
| 13 | 0.0745 | 0.0000 | 0.0000 | 0.9255 |
| 14 | 0.0000 | 0.0000 | 0.8446 | 0.1554 |
| 15 | 0.2888 | 0.5636 | 0.0175 | 0.1300 |
TFs using this motif
1 known/direct, 0 nearest-neighbor >70%, 13 nearest-neighbor 50–70%, 0 structure-derived. Showing all 14 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| Q15915 | Known | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_6 | |
| O95409 | Nearest Neighbor (50–70%) | 58.8% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,zf-met,zf-H2C2_2,zf-C2H2_6 |
| B4DNF7 | Nearest Neighbor (50–70%) | 58.0% | zf-C2H2_4,CHORD,zf-C2H2,IL17,zf-H2C2_2,zf-H2C2_5,zf-C2H2_6 |
| P08151 | Nearest Neighbor (50–70%) | 58.0% | zf-C2H2_4,CHORD,zf-C2H2,IL17,zf-H2C2_2,zf-C2H2_6 |
| A0A7I2PJA1 | Nearest Neighbor (50–70%) | 57.6% | zf-C2H2_4,zf-H2C2_2,zf-C2H2,TP1 |
| A0A7I2V4X9 | Nearest Neighbor (50–70%) | 57.6% | zf-C2H2_4,zf-H2C2_2,zf-C2H2 |
| B4DRK1 | Nearest Neighbor (50–70%) | 57.6% | zf-C2H2_4,zf-H2C2_2,zf-C2H2 |
| Q0VGA0 | Nearest Neighbor (50–70%) | 57.6% | zf-C2H2_4,zf-H2C2_2,zf-C2H2,TP1 |
| P08048 | Nearest Neighbor (50–70%) | 51.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,ROS_MUCR,zf-met,zf-H2C2_2,zf-H2C2_5,Zfx_Zfy_act |
| B7ZKJ5 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,ROS_MUCR,zf-met,zf-H2C2_2,zf-H2C2_5,Zfx_Zfy_act,Adhes-Ig_like |
| E9PEP7 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,ROS_MUCR,zf-met,zf-H2C2_2,zf-H2C2_5,Zfx_Zfy_act |
| P17010 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,ROS_MUCR,zf-met,zf-H2C2_2,zf-H2C2_5,Zfx_Zfy_act |
| Q8WWU0 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,ROS_MUCR,zf-met,zf-H2C2_2,zf-C2H2_2,zf-H2C2_5,DWNN,Zfx_Zfy_act |
| Q8WXB7 | Nearest Neighbor (50–70%) | 50.0% | zf-C2H2_4,zf-C2H2,zf-C2H2_jaz,ROS_MUCR,zf-met,zf-H2C2_2,zf-C2H2_2,zf-H2C2_5,Zfx_Zfy_act |