CisBP motif
M08587_2.00
Source: CisBP
Sequence logo
Matrix
| Position | A | C | G | T |
|---|---|---|---|---|
| 1 | 0.1110 | 0.2443 | 0.2352 | 0.4095 |
| 2 | 0.1898 | 0.1883 | 0.2658 | 0.3560 |
| 3 | 0.5690 | 0.0976 | 0.1372 | 0.1962 |
| 4 | 0.0854 | 0.5540 | 0.1586 | 0.2020 |
| 5 | 0.1797 | 0.6234 | 0.0474 | 0.1494 |
| 6 | 0.1302 | 0.1473 | 0.0854 | 0.6372 |
| 7 | 0.4089 | 0.1286 | 0.1122 | 0.3502 |
| 8 | 0.0974 | 0.2341 | 0.0339 | 0.6346 |
| 9 | 0.7509 | 0.1252 | 0.0460 | 0.0780 |
| 10 | 0.8656 | 0.0184 | 0.0188 | 0.0972 |
| 11 | 0.0972 | 0.0188 | 0.0184 | 0.8656 |
| 12 | 0.0780 | 0.0460 | 0.1252 | 0.7509 |
| 13 | 0.6346 | 0.0339 | 0.2341 | 0.0974 |
| 14 | 0.4958 | 0.0410 | 0.0606 | 0.4025 |
| 15 | 0.6372 | 0.0854 | 0.1473 | 0.1302 |
| 16 | 0.1970 | 0.2629 | 0.1468 | 0.3933 |
| 17 | 0.1741 | 0.2750 | 0.2715 | 0.2794 |
| 18 | 0.5251 | 0.1042 | 0.1016 | 0.2692 |
| 19 | 0.1563 | 0.2901 | 0.4559 | 0.0977 |
| 20 | 0.2494 | 0.3810 | 0.2011 | 0.1685 |
| 21 | 0.3362 | 0.1730 | 0.2293 | 0.2615 |
TFs using this motif
0 known/direct, 0 nearest-neighbor >70%, 19 nearest-neighbor 50–70%, 0 structure-derived. Showing all 19 assignments.
| TF record | Motif assignment | Identity | PFAM Families |
|---|---|---|---|
| A8K720 | Nearest Neighbor (50–70%) | 60.6% | HJURP_C,SRF-TF |
| A0A0D9SET2 | Nearest Neighbor (50–70%) | 59.0% | HJURP_C,SRF-TF |
| A0A0D9SFD0 | Nearest Neighbor (50–70%) | 59.0% | HJURP_C,SRF-TF |
| A0A0D9SGI5 | Nearest Neighbor (50–70%) | 59.0% | HJURP_C,SRF-TF |
| A0A0R4J2G5 | Nearest Neighbor (50–70%) | 59.0% | HJURP_C,SRF-TF |
| A0A0S2Z454 | Nearest Neighbor (50–70%) | 59.0% | HJURP_C,SRF-TF |
| A0A0S2Z4N0 | Nearest Neighbor (50–70%) | 59.0% | PAT1,HJURP_C,SRF-TF |
| A0A1B0GV32 | Nearest Neighbor (50–70%) | 59.0% | HJURP_C,SRF-TF |
| A0A8I5KPE6 | Nearest Neighbor (50–70%) | 59.0% | HJURP_C,SRF-TF |
| A0A8I5KVQ4 | Nearest Neighbor (50–70%) | 59.0% | HJURP_C,SRF-TF |
| B3KQ23 | Nearest Neighbor (50–70%) | 59.0% | SRF-TF |
| B8ZZJ5 | Nearest Neighbor (50–70%) | 59.0% | SRF-TF |
| D6R942 | Nearest Neighbor (50–70%) | 59.0% | HJURP_C,SRF-TF |
| D6RB91 | Nearest Neighbor (50–70%) | 59.0% | DUF4227,HJURP_C,SRF-TF |
| D6RC63 | Nearest Neighbor (50–70%) | 59.0% | HJURP_C,SRF-TF |
| D8L7E9 | Nearest Neighbor (50–70%) | 59.0% | HJURP_C,SRF-TF |
| B2R681 | Nearest Neighbor (50–70%) | 57.5% | HJURP_C,SRF-TF |
| Q59GI1 | Nearest Neighbor (50–70%) | 54.0% | SRF-TF |
| A0A1B0GVI4 | Nearest Neighbor (50–70%) | 51.2% | CreA,SRF-TF |