CisBP motif

M09366_2.00

Source: CisBP

Download MEME Scan DNA CIS-BP v2

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Matrix 22 positions

Position	A	C	G	T
1	0.2500	0.2576	0.1515	0.3409
2	0.1212	0.5379	0.1667	0.1742
3	0.1136	0.4167	0.0985	0.3712
4	0.0379	0.4697	0.3333	0.1591
5	0.1667	0.0758	0.6970	0.0606
6	0.0303	0.0985	0.1439	0.7273
7	0.0985	0.3333	0.0227	0.5455
8	0.1364	0.1515	0.4015	0.3106
9	0.0076	0.8258	0.0530	0.1136
10	0.0076	0.8636	0.0152	0.1136
11	0.6288	0.2273	0.0455	0.0985
12	0.1288	0.1288	0.0227	0.7197
13	0.2045	0.0379	0.7348	0.0227
14	0.1591	0.0303	0.7727	0.0379
15	0.0985	0.7576	0.0379	0.1061
16	0.7197	0.0227	0.1970	0.0606
17	0.9394	0.0000	0.0530	0.0076
18	0.0227	0.8939	0.0076	0.0758
19	0.3182	0.3258	0.1818	0.1742
20	0.0606	0.3182	0.5758	0.0455
21	0.1212	0.5303	0.2576	0.0909
22	0.0606	0.4773	0.3333	0.1288

TFs using this motif 7 linked TF records

1 known/direct, 1 nearest-neighbor >70%, 5 nearest-neighbor 50–70%, 0 structure-derived. Showing all 7 assignments.

TF record	Motif assignment	Identity	PFAM Families
K7EJD4	Known		RFX_DNA_binding
B7Z7Y7	Nearest Neighbor (>70%)	88.8%	RFX_DNA_binding
B7Z8F5	Nearest Neighbor (50–70%)	68.3%	RFX1_trans_act
F6UGA0	Nearest Neighbor (50–70%)	64.0%	RFX_DNA_binding,Pox_D5,RFX1_trans_act
P22670	Nearest Neighbor (50–70%)	57.7%	RFX_DNA_binding,Nucleoplasmin,RFX1_trans_act
D6RAX4	Nearest Neighbor (50–70%)	50.8%	RFX_DNA_binding
E9PDA6	Nearest Neighbor (50–70%)	50.8%	RFX_DNA_binding