JASPAR motif

MA0804.1

Source: JASPAR

Download MEME Scan DNA Open in JASPAR

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Matrix 20 positions

Position	A	C	G	T
1	0.2637	0.1388	0.2047	0.3927
2	0.1817	0.1040	0.1928	0.5215
3	0.0075	0.0227	0.0048	0.9650
4	0.2762	0.4932	0.1829	0.0478
5	0.6184	0.0121	0.3193	0.0501
6	0.0024	0.9875	0.0030	0.0072
7	0.9404	0.0015	0.0573	0.0008
8	0.0684	0.7575	0.0385	0.1356
9	0.2252	0.4412	0.2099	0.1238
10	0.1035	0.0819	0.0537	0.7609
11	0.7478	0.0422	0.1072	0.1027
12	0.1305	0.1702	0.4810	0.2182
13	0.1408	0.0300	0.7613	0.0679
14	0.0018	0.0637	0.0057	0.9289
15	0.0057	0.0004	0.9913	0.0026
16	0.0663	0.2884	0.0167	0.6286
17	0.0411	0.0995	0.6465	0.2129
18	0.9633	0.0034	0.0262	0.0072
19	0.5719	0.1421	0.1299	0.1561
20	0.4436	0.1649	0.1639	0.2276

TFs using this motif 8 linked TF records

1 known/direct, 3 nearest-neighbor >70%, 4 nearest-neighbor 50–70%, 0 structure-derived. Showing all 8 assignments.

TF record	Motif assignment	Identity	PFAM Families
O60806	Known		T-box
H0Y5A7	Nearest Neighbor (>70%)	83.4%	T-box
B3KRD9	Nearest Neighbor (>70%)	83.3%	T-box
C3RYR1	Nearest Neighbor (>70%)	80.0%	T-box
B7Z5X5	Nearest Neighbor (50–70%)	55.6%	T-box
X5D304	Nearest Neighbor (50–70%)	55.2%	T-box
H7C0B1	Nearest Neighbor (50–70%)	53.6%	Nairo_nucleo,T-box
A8K3J6	Nearest Neighbor (50–70%)	50.2%	T-box